RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 BEST4Q8NFU0 473 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SLC13A3Q8WWT9 602 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CELF1Q92879 486 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TARS2Q9BW92 718 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RASSF1Q9NS23 344 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF282Q9UDV7 671 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 EGFL7Q9UHF1 273 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF639Q9UID6 485 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 PNMA8BQ9ULN7 279 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SMIM22K7EJ46 135 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CHMP24386 653 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CDH5P33151 784 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SSTP61278 116 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF33AQ06730 810 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RPA4Q13156 261 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 OCLNQ16625 522 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SH3PXD2AQ5TCZ1 1133 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF697Q5TEC3 545 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 KIAA0930Q6ICG6 404 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 LCN8Q6JVE9 175 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RETSATQ6NUM9 610 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 FAM199XQ6PEV8 388 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ZFPM1Q8IX07 1006 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CYP4X1Q8N118 509 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 DENND1AQ8TEH3 1009 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SETD7Q8WTS6 366 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CNPPD1Q9BV87 410 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ATXN3LQ9H3M9 355 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SAV1Q9H4B6 383 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TFB2MQ9H5Q4 396 aaKnown RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SMURF1Q9HCE7 757 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ENTPD4Q9Y227 616 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 PCDHGB2Q9Y5G2 931 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CEPT1Q9Y6K0 416 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 A0A1W2PP18 115 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SCN2BO60939 215 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 OAZ2O95190 189 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 AP2A1O95782 977 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MOCS2O96007 188 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-216ENST00000569240 RAB4AP20338 218 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 FBXW4P57775 412 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 DSTNP60981 165 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 USP45Q70EL2 814 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MOB2Q70IA6 237 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TMEM86AQ8N2M4 240 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 MINDY1Q8N5J2 469 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 BPIFB1Q8TDL5 484 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 CANT1Q8WVQ1 401 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 NXPE2Q96DL1 559 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 SLC39A13Q96H72 371 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 POPDC2Q9HBU9 364 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ATP13A1Q9HD20 1204 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 ENPP5Q9UJA9 477 aa7.03□□□□□ -1.28
CNOT1-216ENST00000569240 TGOLN2O43493 480 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 PAK4O96013 591 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ALDH1A1P00352 501 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 GKN3PP0CG01 181 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 PTPN9P43378 593 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 RPP38P78345 283 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SNTA1Q13424 505 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 FGL2Q14314 439 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SUSD4Q5VX71 490 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ARL11Q969Q4 196 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF341Q9BYN7 854 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 RSPH9Q9H1X1 276 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 MGAT4BQ9UQ53 548 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CDH10Q9Y6N8 788 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 BORCS7-ASMTA0A0B4J1R7 106 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 A0A0U1RQJ8 604 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 RHPN2P1A8MT19 583 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SBK2P0C263 348 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 DSG3P32926 999 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ALDH3B2P48448 385 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 RARRES1P49788 294 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 BAMBIQ13145 260 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 DDX39BQ13838 428 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TCEA2Q15560 299 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CHSY3Q70JA7 882 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SVBPQ8N300 66 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SLC41A3Q96GZ6 507 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF416Q9BWM5 594 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TP63Q9H3D4 680 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 FBXO44Q9H4M3 255 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 LRTM1Q9HBL6 345 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZC3H4Q9UPT8 1303 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 A0A1W2PQ67 120 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SMCO3A2RU48 225 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 F8VP50 259 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 GABRDO14764 452 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SLC7A4O43246 635 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 IL4RP24394 825 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CDKN2CP42773 168 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 MAGEA12P43365 314 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ADAM8P78325 824 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CYCSP99999 105 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 IRF8Q02556 426 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 GALNT1Q10472 559 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CBWD6Q4V339 395 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms