RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
RNF40-211ENST00000567365 GATA6Q92908 595 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 INSM2Q96T92 566 aaPredicted RBP12.15□□□□□ -0.46
RNF40-211ENST00000567365 TTC1Q99614 292 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 PHACTR1Q9C0D0 580 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 RAB17Q9H0T7 212 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 EPB41L5Q9HCM4 733 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 SLC40A1Q9NP59 571 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 ZDHHC18Q9NUE0 388 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 DMGDHQ9UI17 866 aaKnown RBP12.15□□□□□ -0.46
RNF40-211ENST00000567365 ZMIZ1Q9ULJ6 1067 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 CLCA2Q9UQC9 943 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 MED16Q9Y2X0 877 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 A0A1W2PNU3 283 aaPredicted RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 FAM149AA5PLN7 773 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 LILRA5A6NI73 299 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 GPC4O75487 556 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 C1QAP02745 245 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 OR56A5P0C7T3 313 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 ACADLP28330 430 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 PBLDP30039 288 aaPredicted RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 CSF2RBP32927 897 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 PPARGP37231 505 aaPredicted RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 CD151P48509 253 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 SLC7A5Q01650 507 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 ZFP36L1Q07352 338 aaKnown RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 TARDBPQ13148 414 aaKnown RBP eCLIP12.14□□□□□ -0.47
RNF40-211ENST00000567365 GBX1Q14549 363 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 CLPPQ16740 277 aaPredicted RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 LONRF1Q17RB8 773 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 ISXQ2M1V0 245 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 RNF187Q5TA31 235 aaPredicted RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 TRMT10BQ6PF06 316 aaKnown RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 ZNF574Q6ZN55 896 aaPredicted RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 TMEM26Q6ZUK4 368 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 SLC9B2Q86UD5 537 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 ZNF761Q86XN6 746 aaPredicted RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 SLITRK4Q8IW52 837 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 FBXO25Q8TCJ0 367 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 WWP1Q9H0M0 922 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 VPS37BQ9H9H4 285 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 L2HGDHQ9H9P8 463 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 INTS10Q9NVR2 710 aaKnown RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 MOCS1Q9NZB8 636 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 PDP2Q9P2J9 529 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 PSMD13Q9UNM6 376 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 CHMP2BQ9UQN3 213 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
RNF40-211ENST00000567365 ENTPD2Q9Y5L3 495 aa12.14□□□□□ -0.47
RNF40-211ENST00000567365 APC2O95996 2303 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 RHPN2P1A8MT19 583 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 IQCF5A8MTL0 148 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 LIN7AO14910 233 aaPredicted RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 EIF3HO15372 352 aaKnown RBP eCLIP12.13□□□□□ -0.474e-7■□□□□ 8.7
RNF40-211ENST00000567365 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 NDUFS3O75489 264 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 CPNE6O95741 557 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 FTH1P02794 183 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 RPLP0P05388 317 aaKnown RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 MTHFD1P11586 935 aaKnown RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 AOAHP28039 575 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 GABRB3P28472 473 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 CCKBRP32239 447 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 CCR7P32248 378 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 PREPP48147 710 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 EPHA4P54764 986 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 GPLD1P80108 840 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 GUCY2DQ02846 1103 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 PDIA2Q13087 525 aaKnown RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 CTBP1Q13363 440 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 HSP90AA5PQ58FG0 334 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 ZNF470Q6ECI4 717 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 C8orf74Q6P047 294 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 ZNF549Q6P9A3 640 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 UNQ6494/PRO21346Q6UXR6 183 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 RBM44Q6ZP01 1051 aaKnown RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 GALNT7Q86SF2 657 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 SDCCAG8Q86SQ7 713 aaPredicted RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 KCNMB4Q86W47 210 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 RBM12BQ8IXT5 1001 aaKnown RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 Q8N9G6 341 aaPredicted RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 C2CD4AQ8NCU7 369 aaPredicted RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 SH3KBP1Q96B97 665 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 GRAMD1AQ96CP6 724 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 CERS2Q96G23 380 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 TBC1D10AQ9BXI6 508 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 TWSG1Q9GZX9 223 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 LATS2Q9NRM7 1088 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 FAM8A1Q9UBU6 413 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 FBXO5Q9UKT4 447 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 ATXN7L1Q9ULK2 861 aaPredicted RBP12.13□□□□□ -0.47
RNF40-211ENST00000567365 PCDHB1Q9Y5F3 818 aa12.13□□□□□ -0.47
RNF40-211ENST00000567365 ANKRD11Q6UB99 2663 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms