RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SPASTQ9UBP0 616 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 SLC23A2Q9UGH3 650 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CRYL1Q9Y2S2 319 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 ARL2BPQ9Y2Y0 163 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 PCDHGB2Q9Y5G2 931 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 PSAT1Q9Y617 370 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 COMMD10Q9Y6G5 202 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 TMEM120BA0PK00 339 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 MGAT4DA6NG13 374 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 OR2AG2A6NM03 316 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 F8W8V4 182 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 H3BM21 787 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 H3BMM5 538 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 MGRN1O60291 552 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 ACSL3O95573 720 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 OR56A5P0C7T3 313 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 PKMP14618 531 aaKnown RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 ARHGAP8P85298 464 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 MPP1Q00013 466 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 IL9RQ01113 521 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 CTBSQ01459 385 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 SLC14A1Q13336 389 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 SMAD1Q15797 465 aaKnown RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 SNCBQ16143 134 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 PRRT3Q5FWE3 981 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 CTSL3PQ5NE16 218 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 FBXW10Q5XX13 1052 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 METRNLQ641Q3 311 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 CNSTQ6PJW8 725 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 PRR23CQ6ZRP0 262 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 MARK2Q7KZI7 788 aaKnown RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 ZC3HC1Q86WB0 502 aaKnown RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 GALNT13Q8IUC8 556 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 MINDY1Q8N5J2 469 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 OR2L2Q8NH16 312 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 MDM1Q8TC05 714 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 OR2M4Q96R27 311 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 CPNE1Q99829 537 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 FBXO6Q9NRD1 293 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 TM7SF3Q9NS93 570 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 RXFP3Q9NSD7 469 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 APOBEC3BQ9UH17 382 aaKnown RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 PCOLCE2Q9UKZ9 415 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 CORO1CQ9ULV4 474 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-206ENST00000565990 MED16Q9Y2X0 877 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 PRKAB1Q9Y478 270 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 PLEKHM1Q9Y4G2 1056 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 GPSM3Q9Y4H4 160 aa12.4□□□□□ -0.42
SF3B3-206ENST00000565990 LMO7DNF2Z398 122 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 TPP1O14773 563 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 SCAMP1O15126 338 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 YY2O15391 372 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 AQP9O43315 295 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 PIAS1O75925 651 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 CTSEP14091 401 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 AOAHP28039 575 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 EPHA8P29322 1005 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-206ENST00000565990 FMO4P31512 558 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 MNAT1P51948 309 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 CSE1LP55060 971 aaKnown RBP12.39□□□□□ -0.43
SF3B3-206ENST00000565990 TIAL1Q01085 375 aaKnown RBP eCLIP12.39□□□□□ -0.43
SF3B3-206ENST00000565990 ELOCQ15369 112 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 GRTP1Q5TC63 336 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 CYB5D1Q6P9G0 228 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 WASH2PQ6VEQ5 465 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 DET1Q7L5Y6 550 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 CHST15Q7LFX5 561 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-206ENST00000565990 STRA8Q7Z7C7 330 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 AMZ2Q86W34 360 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 TRAPPC5Q8IUR0 188 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 BEND7Q8N7W2 519 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-206ENST00000565990 ZNF548Q8NEK5 533 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-206ENST00000565990 CFAP61Q8NHU2 1237 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 CCL4L1Q8NHW4 92 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 NAT14Q8WUY8 206 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 DHRS4Q9BTZ2 278 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 LRRC61Q9BV99 259 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 GTPBP2Q9BX10 602 aaKnown RBP12.39□□□□□ -0.43
SF3B3-206ENST00000565990 GSDMCQ9BYG8 508 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 WASH6PQ9NQA3 447 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 UCKL1Q9NWZ5 548 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 SLC17A6Q9P2U8 582 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 MOSPD1Q9UJG1 213 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 GNPTGQ9UJJ9 305 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 VWA7Q9Y334 891 aa12.39□□□□□ -0.43
SF3B3-206ENST00000565990 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-206ENST00000565990 NEMP2A6NFY4 417 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 IQCF5A8MTL0 148 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 KPNA5O15131 536 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 GPC4O75487 556 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 FTH1P02794 183 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 BRAFP15056 766 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 CCR7P32248 378 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 GP5P40197 560 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 CD151P48509 253 aa12.38□□□□□ -0.43
SF3B3-206ENST00000565990 CCT8P50990 548 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms