RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 PRAMEF10O60809 474 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PHF2O75151 1096 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 BANF1O75531 89 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 POP4O95707 220 aaKnown RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ASLP04424 464 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 UGT2B4P06133 528 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ALPIP09923 528 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 NME1P15531 152 aaKnown RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CTPS1P17812 591 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SERPINB6P35237 376 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ADRA1AP35348 466 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CETN2P41208 172 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PSMD8P48556 350 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 RENBPP51606 427 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PDX1P52945 283 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 MAPK10P53779 464 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CLDN2P57739 230 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 TAS2R38P59533 333 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SULT2A1Q06520 285 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 NSUN2Q08J23 767 aaKnown RBP eCLIP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 STAT4Q14765 748 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ZNF124Q15973 351 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 DEFB133Q30KQ1 61 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 TTC31Q49AM3 519 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 INO80DQ53TQ3 878 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 LCE4AQ5TA78 99 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ZNF776Q68DI1 518 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 KCTD11Q693B1 232 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CAPRIN2Q6IMN6 1127 aaKnown RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 RETSATQ6NUM9 610 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 DRICH1Q6PGQ1 229 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 RBM44Q6ZP01 1051 aaKnown RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 TMPRSS9Q7Z410 1059 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 TICAM1Q8IUC6 712 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 IGDCC3Q8IVU1 814 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CCDC117Q8IWD4 279 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 MMP21Q8N119 569 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PELI3Q8N2H9 469 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 RYBPQ8N488 228 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SLC25A41Q8N5S1 370 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 OR2AP1Q8NGE2 309 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CHAC2Q8WUX2 184 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PIH1D2Q8WWB5 315 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 USP7Q93009 1102 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ISG20Q96AZ6 181 aaKnown RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ZNF669Q96BR6 464 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 RTP4Q96DX8 246 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SPATA13Q96N96 652 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ZNF599Q96NL3 588 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CLUHP3Q96NS8 147 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 NUDCD1Q96RS6 583 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 TRIB3Q96RU7 358 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 MGME1Q9BQP7 344 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 LGR4Q9BXB1 951 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SLC12A9Q9BXP2 914 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 RSPH9Q9H1X1 276 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PABPC3Q9H361 631 aaKnown RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ZDHHC6Q9H6R6 413 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ERVMER34-1Q9H9K5 563 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 L2HGDHQ9H9P8 463 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 FOXJ2Q9P0K8 574 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 KLHL3Q9UH77 587 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PCYOX1Q9UHG3 505 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SLC25A13Q9UJS0 675 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ANAPC2Q9UJX6 822 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 ITM2BQ9Y287 266 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SNX24Q9Y343 169 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 TTLL3Q9Y4R7 772 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 PCDHGA8Q9Y5G5 932 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 SPO11Q9Y5K1 396 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 V9GYY5 206 aaPredicted RBP6.11□□□□□ -1.43
UBFD1-204ENST00000565634 APCP25054 2843 aa6.11□□□□□ -1.43
UBFD1-204ENST00000565634 CCDC168Q8NDH2 2452 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CCDC187A0A096LP49 1063 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 TARSL2A2RTX5 802 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 LRRC72A6NJI9 287 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 C16orf96A6NNT2 1141 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 GOLGA8MH3BSY2 632 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PLD2O14939 933 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 YKT6O15498 198 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 TPD52L2O43399 206 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 DUX1O43812 170 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 VPS4BO75351 444 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PIAS2O75928 621 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 GSRP00390 522 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 IL1BP01584 269 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 F7P08709 466 aaPredicted RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PRKAR1AP10644 381 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 GM2AP17900 193 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 PAFAH1B1P43034 410 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 RPL21P46778 160 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 WNT3AP56704 352 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 ST8SIA6P61647 398 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CRADDP78560 199 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 CNTN1Q12860 1018 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 GPS1Q13098 491 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 MRPL49Q13405 166 aaKnown RBP6.1□□□□□ -1.43
UBFD1-204ENST00000565634 C1orf61Q13536 156 aa6.1□□□□□ -1.43
UBFD1-204ENST00000565634 FGL2Q14314 439 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms