RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 H0YHG0 523 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 AZIN1O14977 448 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 SLC16A5O15375 505 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 KLHL41O60662 606 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 ADAM23O75077 832 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 SLCO2B1O94956 709 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 PCDH8O95206 1070 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 KLF8O95600 359 aaPredicted RBP19.2■□□□□ 0.66
CLN6-205ENST00000564846 DNTTP04053 509 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 ESRRAP11474 423 aaPredicted RBP19.2■□□□□ 0.66
CLN6-205ENST00000564846 BTKQ06187 659 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 AGERQ15109 404 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 FBXO48Q5FWF7 155 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 TREML1Q86YW5 311 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 BEND7Q8N7W2 519 aaPredicted RBP19.2■□□□□ 0.66
CLN6-205ENST00000564846 ASB11Q8WXH4 323 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 DLG3Q92796 817 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 FAM131CQ96AQ9 280 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 MSANTD3Q96H12 275 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 ZNF514Q96K75 400 aaPredicted RBP19.2■□□□□ 0.66
CLN6-205ENST00000564846 PPP1R36Q96LQ0 422 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 EGFL8Q99944 293 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 SLC12A9Q9BXP2 914 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 TRIM54Q9BYV2 358 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 MKRN2Q9H000 416 aaKnown RBP19.2■□□□□ 0.66
CLN6-205ENST00000564846 ZBTB26Q9HCK0 441 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 TRIM39Q9HCM9 518 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 ARHGEF3Q9NR81 526 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 EIF2B4Q9UI10 523 aaKnown RBP19.2■□□□□ 0.66
CLN6-205ENST00000564846 PIKFYVEQ9Y2I7 2098 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 A0A1W2PQF6 199 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 IGLON5A6NGN9 336 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 PRR5-ARHGAP8B1AHC4 643 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 PPP6CO00743 305 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 SDHDO14521 159 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 SKAP2O75563 359 aaPredicted RBP19.19■□□□□ 0.66
CLN6-205ENST00000564846 GUCA1CO95843 209 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 ARHGAP8P85298 464 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 CDKL1Q00532 357 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 UGT3A2Q3SY77 523 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 BCL7AQ4VC05 210 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 SYTL3Q4VX76 610 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 KANK2Q63ZY3 851 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 CLEC6AQ6EIG7 209 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 TMEM220Q6QAJ8 160 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 ADAMTSL4Q6UY14 1074 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 CEP70Q8NHQ1 597 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 ACTRT2Q8TDY3 377 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 SKA2Q8WVK7 121 aaPredicted RBP19.19■□□□□ 0.66
CLN6-205ENST00000564846 RHBDF1Q96CC6 855 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 SLC7A6OSQ96CW6 309 aaPredicted RBP19.19■□□□□ 0.66
CLN6-205ENST00000564846 PARVBQ9HBI1 364 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 FBXL12Q9NXK8 326 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 SERGEFQ9UGK8 458 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 TAGLN3Q9UI15 199 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 SCML1Q9UN30 329 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 GIPC1O14908 333 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 VEGFDO43915 354 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 MAGEA9P43362 315 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 RPIAP49247 311 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 GTF2H3Q13889 308 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 NXNQ6DKJ4 435 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 UBE2R2Q712K3 238 aaPredicted RBP19.19■□□□□ 0.66
CLN6-205ENST00000564846 ADGRG6Q86SQ4 1221 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 TMPRSS6Q8IU80 811 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 VRK3Q8IV63 474 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 UBTD2Q8WUN7 234 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 GLMNQ92990 594 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 TMEM159Q96B96 161 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 HIC2Q96JB3 615 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 STK38LQ9Y2H1 464 aa19.19■□□□□ 0.66
CLN6-205ENST00000564846 LRRK1Q38SD2 2015 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 PABPN1LA6NDY0 278 aaKnown RBP19.18■□□□□ 0.66
CLN6-205ENST00000564846 GFYI3L273 518 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 ESRRBO95718 433 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 ENO1P06733 434 aaKnown RBP19.18■□□□□ 0.66
CLN6-205ENST00000564846 ANXA5P08758 320 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 GSTM1P09488 218 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 HIST1H2AGP0C0S8 130 aaPredicted RBP19.18■□□□□ 0.66
CLN6-205ENST00000564846 HIST1H2ADP20671 130 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 PTPN4P29074 926 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 MAPK9P45984 424 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 PKNOX1P55347 436 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 GSTM4Q03013 218 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 SKIV2LQ15477 1246 aaKnown RBP19.18■□□□□ 0.66
CLN6-205ENST00000564846 RBBP7Q16576 425 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 FBXO43Q4G163 708 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 PNCKQ6P2M8 343 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 TTC23LQ6PF05 361 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 TCAIMQ8N3R3 496 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 GANCQ8TET4 914 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 ESAMQ96AP7 390 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 HIST1H2AHQ96KK5 128 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 ZNF382Q96SR6 550 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 HIST1H2AJQ99878 128 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 H2AFJQ9BTM1 129 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 CD244Q9BZW8 370 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 MRGBPQ9NV56 204 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 WWOXQ9NZC7 414 aa19.18■□□□□ 0.66
CLN6-205ENST00000564846 PDE10AQ9Y233 779 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms