RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PDE1BQ01064 536 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 SPARCL1Q14515 664 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 PARP6Q2NL67 630 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 P3H1Q32P28 736 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 METRNLQ641Q3 311 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 PPP1R3BQ86XI6 285 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 GPR150Q8NGU9 434 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 STAMBPL1Q96FJ0 436 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 ALS2CR12Q96Q35 445 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 TMEM121Q9BTD3 319 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 EPN3Q9H201 632 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 FEZ2Q9UHY8 353 aaPredicted RBP18.08■□□□□ 0.48
CLN6-204ENST00000564752 FKBPLQ9UIM3 349 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 ANAPC2Q9UJX6 822 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 PSMD13Q9UNM6 376 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 KCTD3Q9Y597 815 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 PCDHB3Q9Y5E6 796 aa18.08■□□□□ 0.48
CLN6-204ENST00000564752 IGHV5-51A0A0C4DH38 117 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 OR2AG2A6NM03 316 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 CCDC175P0C221 793 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 CCNYL3P0C7X3 344 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 CASRP41180 1078 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 GDF10P55107 478 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 PPP1CAP62136 330 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 NFE2L1Q14494 772 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 CYB5D1Q6P9G0 228 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 KLHL35Q6PF15 583 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 KLHDC8BQ8IXV7 354 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 ZNF398Q8TD17 642 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 ATG4AQ8WYN0 398 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 UBXN4Q92575 508 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 ZNF514Q96K75 400 aaPredicted RBP18.07■□□□□ 0.48
CLN6-204ENST00000564752 LRRC40Q9H9A6 602 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 PDE7BQ9NP56 450 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 LNPEPQ9UIQ6 1025 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 KCND3Q9UK17 655 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 PADI1Q9ULC6 663 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 KCNMB2Q9Y691 235 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 RELNP78509 3460 aa18.07■□□□□ 0.48
CLN6-204ENST00000564752 FLNCQ14315 2725 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 SRP72O76094 671 aaKnown RBP18.06■□□□□ 0.48
CLN6-204ENST00000564752 METTL18O95568 372 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 MT-ND3P03897 115 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 FOLR1P15328 257 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 MSH3P20585 1137 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 SEPT6Q14141 434 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 ERV3-1Q14264 604 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 LONRF2Q1L5Z9 754 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 DENND5AQ6IQ26 1287 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 OR13C4Q8NGS5 318 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 FCRL4Q96PJ5 515 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 FRMD8P1Q9BZ68 369 aaPredicted RBP18.06■□□□□ 0.48
CLN6-204ENST00000564752 ASB8Q9H765 288 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 ARNT2Q9HBZ2 717 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 LZTFL1Q9NQ48 299 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 PCDHGA6Q9Y5G7 932 aa18.06■□□□□ 0.48
CLN6-204ENST00000564752 PTPN13Q12923 2485 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 MGAT4DA6NG13 374 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 NRDCO43847 1150 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 KATNA1O75449 491 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 TIAF1O95411 115 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 RECKO95980 971 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 FURINP09958 794 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 MTHFD1P11586 935 aaKnown RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 HADHAP40939 763 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 ZNF140P52738 457 aaPredicted RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 TMPRSS15P98073 1019 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 RPS6KA1Q15418 735 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 FNBP1LQ5T0N5 605 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 KCTD11Q693B1 232 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 PWWP2BQ6NUJ5 590 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 BPHLQ86WA6 291 aaPredicted RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 SLC13A5Q86YT5 568 aaPredicted RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 LRRC8AQ8IWT6 810 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 TAB3Q8N5C8 712 aaPredicted RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 BEND7Q8N7W2 519 aaPredicted RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 SIDT2Q8NBJ9 832 aaKnown RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 ZFPM2Q8WW38 1151 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 INSM2Q96T92 566 aaPredicted RBP18.05■□□□□ 0.48
CLN6-204ENST00000564752 MAP3K3Q99759 626 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 LHX9Q9NQ69 397 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 CRLS1Q9UJA2 301 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 RARRES3Q9UL19 164 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 ACSL5Q9ULC5 683 aa18.05■□□□□ 0.48
CLN6-204ENST00000564752 SPENQ96T58 3664 aaKnown RBP18.04■□□□□ 0.48
CLN6-204ENST00000564752 OR5K3A6NET4 321 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 PSMD3O43242 534 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 LIASO43766 372 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 CREG1O75629 220 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 AP2A1O95782 977 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 ITGALP20701 1170 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 PBLDP30039 288 aaPredicted RBP18.04■□□□□ 0.48
CLN6-204ENST00000564752 ACY1Q03154 408 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 MSLNQ13421 630 aaPredicted RBP18.04■□□□□ 0.48
CLN6-204ENST00000564752 TUBB3Q13509 450 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 KCNAB1Q14722 419 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 PLCL1Q15111 1095 aa18.04■□□□□ 0.48
CLN6-204ENST00000564752 LACTB2Q53H82 288 aaPredicted RBP18.04■□□□□ 0.48
CLN6-204ENST00000564752 MEI1Q5TIA1 1274 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms