RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TMTC4Q5T4D3 741 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 CAPRIN2Q6IMN6 1127 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 ZNF449Q6P9G9 518 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 SNX20Q7Z614 316 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 SYCE1Q8N0S2 351 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 D2HGDHQ8N465 521 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 UBL4BQ8N7F7 174 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 GALNT6Q8NCL4 622 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 C9orf43Q8TAL5 461 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 INSM2Q96T92 566 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 COPS8Q99627 209 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 TBL1YQ9BQ87 522 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 GORASP1Q9BQQ3 440 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 WWP1Q9H0M0 922 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 KIR3DX1Q9H7L2 352 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 VPS37BQ9H9H4 285 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 LHX9Q9NQ69 397 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 IMP3Q9NV31 184 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 CRLS1Q9UJA2 301 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 CROTQ9UKG9 612 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 AMFRQ9UKV5 643 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 PSMD13Q9UNM6 376 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 MIF4GDA9UHW6 222 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 F5H423 210 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 H7C0S8 307 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 MAP3K7O43318 606 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 PSMB4P28070 264 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 OAS2P29728 719 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 CA5AP35218 305 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 CD151P48509 253 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 PRLHRP49683 370 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 ZNF75DP51815 510 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 VAV2P52735 878 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 ZNF140P52738 457 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 TUBB4BP68371 445 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 PRKAA1Q13131 559 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 RPA4Q13156 261 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 TUBB3Q13509 450 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 TUBB2AQ13885 445 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 KRT33BQ14525 404 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 GSE1Q14687 1217 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 PTPRCAPQ14761 206 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 DEFB109BQ30KR1 87 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 DENND5AQ6IQ26 1287 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 CFAP206Q8IYR0 622 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 NXPE1Q8N323 547 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 LRRC57Q8N9N7 239 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 GPR150Q8NGU9 434 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 HM13Q8TCT9 377 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 C12orf66Q96MD2 445 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 MAP3K3Q99759 626 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 TUBB2BQ9BVA1 445 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 C10orf88Q9H8K7 445 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 LATS2Q9NRM7 1088 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 FGF21Q9NSA1 209 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 SLC24A2Q9UI40 661 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 FKBPLQ9UIM3 349 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 LNPEPQ9UIQ6 1025 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 POLHQ9Y253 713 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 KCNMB2Q9Y691 235 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 DUSP10Q9Y6W6 482 aa11.89□□□□□ -0.51
GTF3C1-204ENST00000564664 MACROD2A1Z1Q3 448 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 RCCD1A6NED2 376 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 GPR39O43194 453 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 KATNA1O75449 491 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 CREG1O75629 220 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 PTMAP06454 111 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 FOLR1P15328 257 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 F8A1P23610 371 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 PBLDP30039 288 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 CASRP41180 1078 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 DNASE1L3Q13609 305 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 LAMB3Q13751 1172 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 P3H1Q32P28 736 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 KCTD11Q693B1 232 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 PWWP2BQ6NUJ5 590 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 C16orf46Q6P387 395 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 ARHGEF18Q6ZSZ5 1173 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 DET1Q7L5Y6 550 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 PEX26Q7Z412 305 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 ACVR1CQ8NER5 493 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 CCDC110Q8TBZ0 833 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 THAP4Q8WY91 577 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 ELMO2Q96JJ3 720 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 LRFN5Q96NI6 719 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 LRRC40Q9H9A6 602 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 C1GALT1Q9NS00 363 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 ZDHHC3Q9NYG2 299 aa11.88□□□□□ -0.51
GTF3C1-204ENST00000564664 BSNQ9UPA5 3926 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 IGLV3-16A0A075B6K0 115 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 TRBV5-4A0A0C4DH59 114 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 PIPSLA2A3N6 862 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 GRID2IPA4D2P6 1211 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 OR6C74A6NCV1 312 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 MKRN2OSH3BPM6 223 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 QSOX1O00391 747 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms