RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 AFF3P51826 1226 aaKnown RBP12.58□□□□□ -0.4
CLK3-214ENST00000564096 C21orf59P57076 290 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 SRP54P61011 504 aaKnown RBP12.58□□□□□ -0.4
CLK3-214ENST00000564096 ARHGAP8P85298 464 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 PPARDQ03181 441 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 DMPKQ09013 629 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 ASPHQ12797 758 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 ILF3Q12906 894 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLK3-214ENST00000564096 GBX1Q14549 363 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 ANGPT1Q15389 498 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 PYCR3Q53H96 274 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 LVRNQ6Q4G3 990 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 CDHR3Q6ZTQ4 885 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 PIWIL4Q7Z3Z4 852 aaKnown RBP12.58□□□□□ -0.4
CLK3-214ENST00000564096 SLC22A15Q8IZD6 547 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 RHEBL1Q8TAI7 183 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 STAG3L4Q8TBR4 150 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 EEF1AKMT1Q8WVE0 214 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 ANKRD49Q8WVL7 239 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 DNASE2BQ8WZ79 361 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 KIAA1191Q96A73 305 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 NXNL1Q96CM4 212 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 PDXPQ96GD0 296 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 SCARF2Q96GP6 870 aaPredicted RBP12.58□□□□□ -0.4
CLK3-214ENST00000564096 SLC30A3Q99726 388 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.4
CLK3-214ENST00000564096 OSGEPL1Q9H4B0 414 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 CYP4F12Q9HCS2 524 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 TM9SF3Q9HD45 589 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 RNF112Q9ULX5 631 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 GPSM3Q9Y4H4 160 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 DGKBQ9Y6T7 804 aa12.58□□□□□ -0.4
CLK3-214ENST00000564096 VCANP13611 3396 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 SPTY2D1-AS1A0A0U1RR47 76 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 SLC5A10A0PJK1 596 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 PRR33A8MZF0 331 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TK2O00142 265 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 IFRD1O00458 451 aaPredicted RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 POLR3GO15318 223 aaPredicted RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 SLC16A5O15375 505 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 BCAT2O15382 392 aaPredicted RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 SMIM24O75264 130 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 GPC4O75487 556 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 SLCO2B1O94956 709 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TSPAN12O95859 305 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TOP3BO95985 862 aaKnown RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 TNFP01375 233 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 CATP04040 527 aaKnown RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 PROCP04070 461 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 RPN2P04844 631 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 MYL2P10916 166 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 NEFHP12036 1026 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 CYP2A7P20853 494 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 HOXD12P35452 270 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 PGGT1BP53609 377 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TUBB8Q3ZCM7 444 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 ACSBG2Q5FVE4 666 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TECRLQ5HYJ1 363 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 ZC3H14Q6PJT7 736 aaKnown RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 TMEM207Q6UWW9 146 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 CHST15Q7LFX5 561 aaPredicted RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TRIM42Q8IWZ5 723 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 CFAP206Q8IYR0 622 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 SLC22A18ASQ8N1D0 253 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 PLD6Q8N2A8 252 aaKnown RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 FSTL5Q8N475 847 aaPredicted RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 SPATA6LQ8N4H0 392 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 OR1E3Q8WZA6 343 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 NELL1Q92832 810 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 CCDC126Q96EE4 140 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TRIM54Q9BYV2 358 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 ALG9Q9H6U8 611 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TRNAU1APQ9NX07 287 aaKnown RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 NUDT4Q9NZJ9 180 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TMEM216Q9P0N5 145 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 SLC17A7Q9P2U7 560 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 GALPQ9UBC7 116 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CLK3-214ENST00000564096 ACSL5Q9ULC5 683 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 DNAJC16Q9Y2G8 782 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 PRKAB1Q9Y478 270 aa12.57□□□□□ -0.4
CLK3-214ENST00000564096 A0A1B0GTW7 788 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 A0A1W2PR77 199 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 SUPT3HB4E1H0 165 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 TLR4O00206 839 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 VILLO15195 856 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 BIRC5O15392 142 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 ZBTB14O43829 449 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 SNX2O60749 519 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 H2AFYO75367 372 aaKnown RBP12.56□□□□□ -0.4
CLK3-214ENST00000564096 SUPT3HO75486 399 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 SP9P0CG40 484 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 IDSP22304 550 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 MAP4P27816 1152 aaKnown RBP12.56□□□□□ -0.4
CLK3-214ENST00000564096 ETV4P43268 484 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 PREPP48147 710 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 SERPINB4P48594 390 aa12.56□□□□□ -0.4
CLK3-214ENST00000564096 HK3P52790 923 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms