RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SLC30A4O14863 429 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 KCNJ13O60928 360 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 POP7O75817 140 aaKnown RBP12.68□□□□□ -0.38
SPG7-209ENST00000564047 FUCA1P04066 466 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 GSTA1P08263 222 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 CBSLP0DN79 551 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 BRAFP15056 766 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 TGM1P22735 817 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 CBSP35520 551 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 CCT5P48643 541 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 DHPSP49366 369 aaPredicted RBP12.68□□□□□ -0.38
SPG7-209ENST00000564047 PGGT1BP53609 377 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 GBX1Q14549 363 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 ZNF460Q14592 562 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 INSCQ1MX18 579 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 ZNF658BQ4V348 819 aaPredicted RBP12.68□□□□□ -0.38
SPG7-209ENST00000564047 PYCR3Q53H96 274 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 CRTC3Q6UUV7 619 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 TMEM207Q6UWW9 146 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 CEP68Q76N32 757 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 C11orf96Q7Z7L8 435 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 CLEC14AQ86T13 490 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
SPG7-209ENST00000564047 GALNT13Q8IUC8 556 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 SLC22A18ASQ8N1D0 253 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 OXR1Q8N573 874 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 NKAPQ8N5F7 415 aaKnown RBP12.68□□□□□ -0.38
SPG7-209ENST00000564047 BANPQ8N9N5 519 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 OR2L2Q8NH16 312 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 ASZ1Q8WWH4 475 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 ELMO1Q92556 727 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 FAM136AQ96C01 138 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 APOPT1Q96IL0 206 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 UBXN10Q96LJ8 280 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 SLC30A3Q99726 388 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 SARS2Q9NP81 518 aaKnown RBP12.68□□□□□ -0.38
SPG7-209ENST00000564047 PCMTD2Q9NV79 361 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 KLQ9UEF7 1012 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 DCDC2Q9UHG0 476 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 ZNHIT2Q9UHR6 403 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 SUFUQ9UMX1 484 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 PCYT1BQ9Y5K3 369 aaPredicted RBP12.68□□□□□ -0.38
SPG7-209ENST00000564047 ZFYVE26Q68DK2 2539 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 WDFY3Q8IZQ1 3526 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 MGAT4DA6NG13 374 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 TLR4O00206 839 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 COPEO14579 308 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 LIN7AO14910 233 aaPredicted RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 VILLO15195 856 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 BCAT2O15382 392 aaPredicted RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 PRPF4O43172 522 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPG7-209ENST00000564047 TYROBPO43914 113 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 GLRA3O75311 464 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 GPC4O75487 556 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 WNT1P04628 370 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 APOA4P06727 396 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 GNSP15586 552 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 CREB1P16220 341 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 ITPKAP23677 461 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 DGKAP23743 735 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 HPDP32754 393 aaPredicted RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 CRHR1P34998 444 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 DPP6P42658 865 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 RGS4P49798 205 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 AFF3P51826 1226 aaKnown RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 IL2P60568 153 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 SRP54P61011 504 aaKnown RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 IRF9Q00978 393 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 PLOD1Q02809 727 aaPredicted RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 DMPKQ09013 629 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 FZD2Q14332 565 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 ALG11Q2TAA5 492 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 TSNAXIP1Q2TAA8 658 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 LRRC8EQ6NSJ5 796 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 AMZ2Q86W34 360 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 CPNE9Q8IYJ1 553 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 CENPLQ8N0S6 344 aaPredicted RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 HM13Q8TCT9 377 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 ANKRD49Q8WVL7 239 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 OR1E3Q8WZA6 343 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 PDLIM5Q96HC4 596 aaKnown RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 TSNARE1Q96NA8 513 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 OR2M4Q96R27 311 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 TIMM29Q9BSF4 260 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 SLC13A1Q9BZW2 595 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 CARS2Q9HA77 564 aaKnown RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 CYP4F12Q9HCS2 524 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 PARD6AQ9NPB6 346 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 MRPL40Q9NQ50 206 aaKnown RBP12.67□□□□□ -0.38
SPG7-209ENST00000564047 GULP1Q9UBP9 304 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 SUSD2Q9UGT4 822 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 MOSPD1Q9UJG1 213 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 ANGPTL2Q9UKU9 493 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 PRKAB1Q9Y478 270 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 DGKBQ9Y6T7 804 aa12.67□□□□□ -0.38
SPG7-209ENST00000564047 A0A1B0GTW7 788 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 SLC5A10A0PJK1 596 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms