RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 CDT1Q9H211 546 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 CXCL16Q9H2A7 254 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 C11orf49Q9H6J7 331 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 CAB39LQ9H9S4 337 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 ZBTB20Q9HC78 741 aaPredicted RBP9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 PTPRHQ9HD43 1115 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 ENTPD7Q9NQZ7 604 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 C14orf119Q9NWQ9 140 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 B3GNT2Q9NY97 397 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 ABCD2Q9UBJ2 740 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 PADI3Q9ULW8 664 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 BTBD3Q9Y2F9 522 aa9.04□□□□□ -0.96
AC138869.3-201ENST00000563960 MAGEB16A2A368 324 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 OR6C70A6NIJ9 312 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PLD2O14939 933 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 XPNPEP2O43895 674 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 SBK3P0C264 359 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PCNAP12004 261 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 HSD17B1P14061 328 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ITGA2P17301 1181 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PIGAP37287 484 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 IL12RB1P42701 662 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TPD52P55327 224 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 SNRPD2P62316 118 aaKnown RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 POLR2GP62487 172 aaKnown RBP eCLIP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CD83Q01151 205 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PTPN11Q06124 597 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 DAG1Q14118 895 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 HADHQ16836 314 aaKnown RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PTPN20Q4JDL3 420 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 SYT6Q5T7P8 510 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PAPD5Q8NDF8 572 aaKnown RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 JOSD2Q8TAC2 188 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 KCTD4Q8WVF5 259 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ZNF606Q8WXB4 792 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ISL2Q96A47 359 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CGRRF1Q99675 332 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 LPIN3Q9BQK8 851 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TRAF4Q9BUZ4 470 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ACE2Q9BYF1 805 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TMEM39AQ9NV64 488 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 FAM118AQ9NWS6 357 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 MTF2Q9Y483 593 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 KCNE2Q9Y6J6 123 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 A0A0U1RQS6 177 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 EFCAB9A8MZ26 197 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 I3L521 148 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 UPK1AO00322 258 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 LRIG2O94898 1065 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 SNX4O95219 450 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CST3P01034 146 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PIGRP01833 764 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CLEC2LP0C7M8 214 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ERVK-10P10266 1014 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 DNAJB2P25686 324 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PSMB9P28065 219 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ERP29P30040 261 aaKnown RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CDH5P33151 784 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CSTF2P33240 577 aaKnown RBP eCLIP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 KRT20P35900 424 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 GP5P40197 560 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 RFX2P48378 723 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 BNC1Q01954 994 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TAP1Q03518 808 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 UBE3AQ05086 875 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CLCA4Q14CN2 919 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TAF12Q16514 161 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 DDR2Q16832 855 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PLA2G4EQ3MJ16 856 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 LEXMQ3ZCV2 418 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 FBXO47Q5MNV8 452 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 SLFN12LQ6IEE8 588 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 MPZL3Q6UWV2 235 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ZYG11AQ6WRX3 759 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 EFL1Q7Z2Z2 1120 aaKnown RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PLCZ1Q86YW0 608 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 LIX1LQ8IVB5 337 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ZMIZ2Q8NF64 920 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 FBXW5Q969U6 566 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TRIM8Q9BZR9 551 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 AMBRA1Q9C0C7 1298 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PRDM5Q9NQX1 630 aaPredicted RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 PIH1D1Q9NWS0 290 aaKnown RBP9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 CMTM6Q9NX76 183 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 MAP10Q9P2G4 905 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 ERVK-18Q9QC07 812 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 GMEB2Q9UKD1 530 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TNFSF13BQ9Y275 285 aa9.03□□□□□ -0.96
AC138869.3-201ENST00000563960 TRPC5OSA6NMA1 111 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 MEIS3P2A8K0S8 358 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 UBDO15205 165 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 ARHGEF9O43307 516 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 NCK1P16333 377 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 ZNF30P17039 623 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 RPL17P18621 184 aaKnown RBP9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 MSH3P20585 1137 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 AKAP5P24588 427 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 SLC15A1P46059 708 aa9.02□□□□□ -0.97
AC138869.3-201ENST00000563960 HAAOP46952 286 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms