RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 KLF1Q13351 362 aaPredicted RBP17.27■□□□□ 0.36
NME3-205ENST00000563854 MSLNQ13421 630 aaPredicted RBP17.27■□□□□ 0.36
NME3-205ENST00000563854 KCNAB1Q14722 419 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 P3H1Q32P28 736 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 DNTTIP2Q5QJE6 756 aaKnown RBP17.27■□□□□ 0.36
NME3-205ENST00000563854 SEL1L2Q5TEA6 688 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 ARMC6Q6NXE6 501 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 C16orf46Q6P387 395 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 OOSP2Q86WS3 158 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 ESX1Q8N693 406 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 SIDT2Q8NBJ9 832 aaKnown RBP17.27■□□□□ 0.36
NME3-205ENST00000563854 GALNT6Q8NCL4 622 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 HM13Q8TCT9 377 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 STARD8Q92502 1023 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 SLC45A3Q96JT2 553 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 RMDN2Q96LZ7 410 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 MAP3K3Q99759 626 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 EFHD1Q9BUP0 239 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 ARNT2Q9HBZ2 717 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 EPHA6Q9UF33 1036 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 ACSL5Q9ULC5 683 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 RPS6KL1Q9Y6S9 549 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 UBA6A0AVT1 1052 aaPredicted RBP17.26■□□□□ 0.35
NME3-205ENST00000563854 OR6C74A6NCV1 312 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 SGTAO43765 313 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 ATP1B2P14415 290 aaPredicted RBP17.26■□□□□ 0.35
NME3-205ENST00000563854 NELFEP18615 380 aaKnown RBP17.26■□□□□ 0.35
NME3-205ENST00000563854 PRLHRP49683 370 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 CDC20Q12834 499 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 TUBB3Q13509 450 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 KCTD11Q693B1 232 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 XKR5Q6UX68 686 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 C6orf15Q6UXA7 325 aaPredicted RBP17.26■□□□□ 0.35
NME3-205ENST00000563854 SERPINA9Q86WD7 417 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 PPP1R3BQ86XI6 285 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 SLC35B2Q8TB61 432 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 KLHL6Q8WZ60 621 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 UBXN4Q92575 508 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 HES6Q96HZ4 224 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 ALS2CR12Q96Q35 445 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 RAB33BQ9H082 229 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 HRASLS2Q9NWW9 162 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 ZDHHC3Q9NYG2 299 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 GUCA1BQ9UMX6 200 aa17.26■□□□□ 0.35
NME3-205ENST00000563854 MRPS18BQ9Y676 258 aaKnown RBP17.26■□□□□ 0.35
NME3-205ENST00000563854 KLHL33A6NCF5 533 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 OR5K3A6NET4 321 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 EBLN1P0CF75 366 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 FOLR1P15328 257 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 ACRV1P26436 265 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 DLSTP36957 453 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 LMAN1P49257 510 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 IL11RAQ14626 422 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 ATP1A1-AS1Q5TC04 95 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 CERS6Q6ZMG9 384 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 KLHDC8BQ8IXV7 354 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 HEXDCQ8WVB3 486 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 LINC00615Q96LM1 132 aaPredicted RBP17.25■□□□□ 0.35
NME3-205ENST00000563854 PDE7BQ9NP56 450 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 NLE1Q9NVX2 485 aaPredicted RBP17.25■□□□□ 0.35
NME3-205ENST00000563854 SLC24A2Q9UI40 661 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 CROTQ9UKG9 612 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 RARRES3Q9UL19 164 aa17.25■□□□□ 0.35
NME3-205ENST00000563854 TLCD2A6NGC4 264 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 AGAP14A8MT82 685 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 PSMD3O43242 534 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 KATNA1O75449 491 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 SPAG6O75602 509 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 TIAF1O95411 115 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 AP2A1O95782 977 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 IFNB1P01574 187 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 SFTPCP11686 197 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 FGF5P12034 268 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 POLR2CP19387 275 aaPredicted RBP17.24■□□□□ 0.35
NME3-205ENST00000563854 TCN2P20062 427 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 CCR10P46092 362 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 POLE2P56282 527 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 SNX1Q13596 522 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 MAP7Q14244 749 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 DEFB109BQ30KR1 87 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 GPR33Q49SQ1 333 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 CCDC38Q502W7 563 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 CLDN19Q8N6F1 224 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 DNAAF3Q8N9W5 541 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 OR52K1Q8NGK4 314 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 CATSPER2Q96P56 530 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 FERD3LQ96RJ6 166 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 CCM2Q9BSQ5 444 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 TSGA10Q9BZW7 698 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 TRIM4Q9C037 500 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 KIR3DX1Q9H7L2 352 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 COG4Q9H9E3 785 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 VPS37BQ9H9H4 285 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 SOHLH2Q9NX45 425 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 COLEC10Q9Y6Z7 277 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 COL6A6A6NMZ7 2263 aa17.24■□□□□ 0.35
NME3-205ENST00000563854 OR51F1A6NGY5 319 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 E7EVH7 732 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 IFRD1O00458 451 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms