RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 COQ6Q9Y2Z9 468 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 UTP11Q9Y3A2 253 aaKnown RBP5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 TCAF1Q9Y4C2 921 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 KCTD3Q9Y597 815 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 ARL5AQ9Y689 179 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 SLCO1B1Q9Y6L6 691 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 V9GYY5 206 aaPredicted RBP5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 CACNA1IQ9P0X4 2223 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 MUC6Q6W4X9 2439 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 KMT2EQ8IZD2 1858 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 ATG2BQ96BY7 2078 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 PIEZO1Q92508 2521 aa5.17□□□□□ -1.58
HERPUD1-207ENST00000563781 C1orf232A0A0U1RR37 186 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CCDC78A2IDD5 438 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PRR23AA6NEV1 266 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 MROH6A6NGR9 719 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 FAM47DPA6NHR8 397 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 LRRC72A6NJI9 287 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 H0Y8X5 98 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PSMD11O00231 422 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CCL22O00626 93 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 NDC80O14777 642 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 WNT9AO14904 365 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 RAD51BO15315 384 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PCDHGA12O60330 932 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PPFIA2O75334 1257 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 RECQL5O94762 991 aaPredicted RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PCDH8O95206 1070 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 SLC4A1P02730 911 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 GSNP06396 782 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 SYPP08247 313 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ELFN1P0C7U0 828 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ZNF30P17039 623 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CA5AP35218 305 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 HMGCLP35914 325 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 TNNT3P45378 269 aaPredicted RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 NPY2RP49146 381 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 SPINT3P49223 89 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PPM1FP49593 454 aaPredicted RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CCR5P51681 352 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ARL4CP56559 192 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PCBP3P57721 371 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 VSNL1P62760 191 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 RPS21P63220 83 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 SARNPP82979 210 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CAV1Q03135 178 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ACVR1Q04771 509 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CCDC15Q0P6D6 951 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 TCF15Q12870 199 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CALCOCO2Q13137 446 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PTPRCAPQ14761 206 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 SLC9A5Q14940 896 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 FASTKD3Q14CZ7 662 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 TAF1AQ15573 450 aaPredicted RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ERCC6LQ2NKX8 1250 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 WSCD2Q2TBF2 565 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PLK5Q496M5 336 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 USP39Q53GS9 565 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PCID2Q5JVF3 399 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 UBAP2Q5T6F2 1119 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 TSTD2Q5T7W7 516 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PMS2CLQ68D20 193 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 DENND2CQ68D51 928 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 KIAA0895LQ68EN5 471 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 KIAA1161Q6NSJ0 714 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ESRP1Q6NXG1 681 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 NEK5Q6P3R8 708 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 SLC36A4Q6YBV0 504 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 KDM7AQ6ZMT4 941 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 Q6ZVL8 140 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 GLT6D1Q7Z4J2 308 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 IGDCC3Q8IVU1 814 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 GSPT2Q8IYD1 628 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 NXPE1Q8N323 547 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 TP53I13Q8NBR0 393 aaPredicted RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 BBOF1Q8ND07 529 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CADM4Q8NFZ8 388 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 OR13C4Q8NGS5 318 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 OR13J1Q8NGT2 312 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 BRSK1Q8TDC3 778 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 CXorf40AQ8TE69 158 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ASB12Q8WXK4 309 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 KLK6Q92876 244 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 DTD2Q96FN9 168 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 DNAJC1Q96KC8 554 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 KLF6Q99612 283 aaPredicted RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 KIFC1Q9BW19 673 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 FRMD8Q9BZ67 464 aaPredicted RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 GPR63Q9BZJ6 419 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 PCED1AQ9H1Q7 454 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ABCG8Q9H221 673 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 MRM3Q9HC36 420 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 BPIFA1Q9NP55 256 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 FAM114A2Q9NRY5 505 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 ZSCAN32Q9NX65 697 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 BFARQ9NZS9 450 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 TMPRSS11EQ9UL52 423 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 RIMKLBQ9ULI2 386 aa5.16□□□□□ -1.58
HERPUD1-207ENST00000563781 NFU1Q9UMS0 254 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms