RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SUN2Q9UH99 717 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 ZNF30P17039 623 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 AOAHP28039 575 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 AKT1P31749 480 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 NRIP1P48552 1158 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 METAP1P53582 386 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 ZNF648Q5T619 568 aaPredicted RBP18.78■□□□□ 0.6
SMPD3-203ENST00000563226 Q6ZSR9 355 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 VRK3Q8IV63 474 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 NPAS3Q8IXF0 933 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 METTL6Q8TCB7 284 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 MCOLN1Q9GZU1 580 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 FAM83DQ9H4H8 585 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 AIG1Q9NVV5 245 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 MAP10Q9P2G4 905 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 ITM2BQ9Y287 266 aa18.78■□□□□ 0.6
SMPD3-203ENST00000563226 YBX2Q9Y2T7 364 aaKnown RBP18.78■□□□□ 0.6
SMPD3-203ENST00000563226 PRRT4C9JH25 899 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 TRIM38O00635 465 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 ACOT8O14734 319 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 MAP3K7O43318 606 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 MATN4O95460 622 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 OR56A5P0C7T3 313 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 IDO1P14902 403 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 ACADSP16219 412 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 GAB4Q2WGN9 574 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 ZNF805Q5CZA5 627 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 SFTPA1Q8IWL2 248 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 ETFBKMTQ8IXQ9 262 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 PPFIBP2Q8ND30 876 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 BHLHE22Q8NFJ8 381 aaPredicted RBP18.77■□□□□ 0.6
SMPD3-203ENST00000563226 ATP6V1E2Q96A05 226 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 CD244Q9BZW8 370 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 SLC52A3Q9NQ40 469 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 GMPR2Q9P2T1 348 aaKnown RBP18.77■□□□□ 0.6
SMPD3-203ENST00000563226 DPP7Q9UHL4 492 aa18.77■□□□□ 0.6
SMPD3-203ENST00000563226 C16orf96A6NNT2 1141 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 FADS2P1A8MWK0 482 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 ADH1CP00326 375 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 SRPRAP08240 638 aaKnown RBP18.77■□□□□ 0.59
SMPD3-203ENST00000563226 ATP1B2P14415 290 aaPredicted RBP18.77■□□□□ 0.59
SMPD3-203ENST00000563226 ZFP36L2P47974 494 aaKnown RBP18.77■□□□□ 0.59
SMPD3-203ENST00000563226 MRPS22P82650 360 aaKnown RBP18.77■□□□□ 0.59
SMPD3-203ENST00000563226 HSPA14Q0VDF9 509 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 GSTA3Q16772 222 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 SULT1C3Q6IMI6 304 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 PARS2Q7L3T8 475 aaKnown RBP18.77■□□□□ 0.59
SMPD3-203ENST00000563226 SPATA19Q7Z5L4 167 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 SFRP1Q8N474 314 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 RIOK2Q9BVS4 552 aaKnown RBP18.77■□□□□ 0.59
SMPD3-203ENST00000563226 CROTQ9UKG9 612 aa18.77■□□□□ 0.59
SMPD3-203ENST00000563226 LRRK1Q38SD2 2015 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 MUC22E2RYF6 1773 aaPredicted RBP18.76■□□□□ 0.59
SMPD3-203ENST00000563226 PRORSD1PA6NEY8 169 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 SGTAO43765 313 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 CBSLP0DN79 551 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 CBSP35520 551 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 PBX2P40425 430 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 PSMD8P48556 350 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 ERVK-21P61565 698 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 GBX1Q14549 363 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 RPS6KA2Q15349 733 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 CRY1Q16526 586 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 CMPK2Q5EBM0 449 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 C6orf136Q5SQH8 315 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 HENMT1Q5T8I9 393 aaKnown RBP18.76■□□□□ 0.59
SMPD3-203ENST00000563226 NAIF1Q69YI7 327 aaPredicted RBP18.76■□□□□ 0.59
SMPD3-203ENST00000563226 PDE12Q6L8Q7 609 aaKnown RBP18.76■□□□□ 0.59
SMPD3-203ENST00000563226 IL27RAQ6UWB1 636 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 HACD2Q6Y1H2 254 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 BEND7Q8N7W2 519 aaPredicted RBP18.76■□□□□ 0.59
SMPD3-203ENST00000563226 UBTD2Q8WUN7 234 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 ASB16Q96NS5 453 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 PCDHAC1Q9H158 963 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 IL1RL2Q9HB29 575 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 RDH14Q9HBH5 336 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 SMOXQ9NWM0 555 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 SLC8A2Q9UPR5 921 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 COL4A3Q01955 1670 aa18.76■□□□□ 0.59
SMPD3-203ENST00000563226 KRT87PA6NCN2 255 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 BCAS2O75934 225 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-203ENST00000563226 OTCP00480 354 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 HLA-EP13747 358 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 PIK3CGP48736 1102 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 DCDC1P59894 354 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 UFM1P61960 85 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 YBX1P67809 324 aaKnown RBP18.75■□□□□ 0.59
SMPD3-203ENST00000563226 BOP1Q14137 746 aaKnown RBP18.75■□□□□ 0.59
SMPD3-203ENST00000563226 GRIN2CQ14957 1233 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 ABRAXAS2Q15018 415 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 LPCAT4Q643R3 524 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 DPPA4Q7L190 304 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 BPIFB1Q8TDL5 484 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 WFIKKN2Q8TEU8 576 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 SPAG4Q9NPE6 437 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 KLHL42Q9P2K6 505 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 OPTCQ9UBM4 332 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 PDE10AQ9Y233 779 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 SLC27A6Q9Y2P4 619 aa18.75■□□□□ 0.59
SMPD3-203ENST00000563226 BBIP1A8MTZ0 92 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms