RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 NFKB1P19838 968 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 RAB15P59190 212 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.3
SPG7-207ENST00000563218 CDK16Q00536 496 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 NIPAL4Q0D2K0 466 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 HIF1AQ16665 826 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 RALGPS1Q5JS13 557 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 PDIK1LQ8N165 341 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 BBS5Q8N3I7 341 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 OR10G6Q8NH81 332 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 C9orf43Q8TAL5 461 aaPredicted RBP13.15□□□□□ -0.3
SPG7-207ENST00000563218 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 PPP1R2P1Q96PQ5 205 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 DPYSL5Q9BPU6 564 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.3
SPG7-207ENST00000563218 TXLNGYQ9BZA5 131 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 ASPSCR1Q9BZE9 553 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 VIPAS39Q9H9C1 493 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 EIF2B3Q9NR50 452 aaKnown RBP13.15□□□□□ -0.3
SPG7-207ENST00000563218 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 RBM22Q9NW64 420 aaKnown RBP eCLIP13.15□□□□□ -0.34e-7■■■■■ 38
SPG7-207ENST00000563218 OGFRQ9NZT2 677 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 CCDC88CQ9P219 2028 aa13.15□□□□□ -0.3
SPG7-207ENST00000563218 MAP2K7O14733 419 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 PSMD3O43242 534 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 HLA-DQB2P05538 268 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 FURINP09958 794 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 ZNF30P17039 623 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 NFKBIAP25963 317 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 CD68P34810 354 aaPredicted RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 HSD17B3P37058 310 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 CASRP41180 1078 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 EPHB1P54762 984 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 LRP8Q14114 963 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 UBAP2LQ14157 1087 aaKnown RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 PLA2G4EQ3MJ16 856 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 HENMT1Q5T8I9 393 aaKnown RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 ALS2CLQ60I27 953 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 ALG1LQ6GMV1 187 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 IYDQ6PHW0 289 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 WDR74Q6RFH5 385 aaPredicted RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 CEACAM20Q6UY09 585 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 CNTD1Q8N815 330 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 MCUQ8NE86 351 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 ARRDC2Q8TBH0 407 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 STARD8Q92502 1023 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 POLR1EQ9GZS1 481 aaKnown RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 GLOD4Q9HC38 313 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 SARS2Q9NP81 518 aaKnown RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 SAYSD1Q9NPB0 183 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 PRDM8Q9NQV8 689 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 SCHIP1Q9P0W5 487 aaPredicted RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 TUBD1Q9UJT1 453 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 TMEM184BQ9Y519 407 aaPredicted RBP13.14□□□□□ -0.31
SPG7-207ENST00000563218 ICE1Q9Y2F5 2266 aa13.14□□□□□ -0.31
SPG7-207ENST00000563218 USP9YO00507 2555 aaPredicted RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 ERI2A8K979 691 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 SASH3O75995 380 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 ANXA9O76027 345 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 MAGEA4P43358 317 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 PDIA2Q13087 525 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 PEX6Q13608 980 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 CLEC18BQ6UXF7 455 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 MTERF4Q7Z6M4 381 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 TMEM135Q86UB9 458 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 RELL1Q8IUW5 271 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 EID2BQ96D98 161 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 CATSPER2Q96P56 530 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 TEFMQ96QE5 360 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 FCRL5Q96RD9 977 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 RUFY1Q96T51 708 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 CDC42EP4Q9H3Q1 356 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 XAB2Q9HCS7 855 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 FBXO8Q9NRD0 319 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 VPS18Q9P253 973 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 ATXN10Q9UBB4 475 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 TP53TG5Q9Y2B4 290 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 AAR2Q9Y312 384 aaKnown RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 SPTBP11277 2137 aa13.13□□□□□ -0.31
SPG7-207ENST00000563218 MN1Q10571 1320 aaPredicted RBP13.13□□□□□ -0.31
SPG7-207ENST00000563218 C1orf232A0A0U1RR37 186 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 AP2A1O95782 977 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 MMP2P08253 660 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 F3P13726 295 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 ZNF8P17098 575 aaPredicted RBP13.12□□□□□ -0.31
SPG7-207ENST00000563218 TYRP1P17643 537 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 STAT5AP42229 794 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 SPINT3P49223 89 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms