RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 STEAP4Q687X5 459 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 TMPRSS12Q86WS5 348 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 MARCH9Q86YJ5 346 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 LMNTD2Q8IXW0 634 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 KRT222Q8N1A0 295 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 AVL9Q8NBF6 648 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
IRF8-203ENST00000563180 LKAAEAR1Q8TD35 194 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 SEC14L1Q92503 715 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 LPGAT1Q92604 370 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 SH3KBP1Q96B97 665 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 INSM2Q96T92 566 aaPredicted RBP16.79■□□□□ 0.28
IRF8-203ENST00000563180 SLC38A3Q99624 504 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 FAM167BQ9BTA0 163 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 SCNM1Q9BWG6 230 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 TSSK1BQ9BXA7 367 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 FBXO6Q9NRD1 293 aaPredicted RBP16.79■□□□□ 0.28
IRF8-203ENST00000563180 INTS10Q9NVR2 710 aaKnown RBP16.79■□□□□ 0.28
IRF8-203ENST00000563180 GNPTGQ9UJJ9 305 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 KLK13Q9UKR3 277 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 FBXO5Q9UKT4 447 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 CRYL1Q9Y2S2 319 aa16.79■□□□□ 0.28
IRF8-203ENST00000563180 CFAP20Q9Y6A4 193 aaKnown RBP16.79■□□□□ 0.28
IRF8-203ENST00000563180 PRAMEF33A0A0G2JMD5 474 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 A0A1W2PQM1 296 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 FAM149AA5PLN7 773 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 BHMG1C9JSJ3 638 aaPredicted RBP16.78■□□□□ 0.28
IRF8-203ENST00000563180 NTN3O00634 580 aaPredicted RBP16.78■□□□□ 0.28
IRF8-203ENST00000563180 LIN7AO14910 233 aaPredicted RBP16.78■□□□□ 0.28
IRF8-203ENST00000563180 PDHA2P29803 388 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 BOP1Q14137 746 aaKnown RBP16.78■□□□□ 0.28
IRF8-203ENST00000563180 NR1D2Q14995 579 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 AMZ1Q400G9 498 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 CDCP2Q5VXM1 449 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 CCDC25Q86WR0 208 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 WDR48Q8TAF3 677 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 PYROXD1Q8WU10 500 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 CERS2Q96G23 380 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 RMDN2Q96LZ7 410 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 C12orf66Q96MD2 445 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 GFM1Q96RP9 751 aaKnown RBP16.78■□□□□ 0.28
IRF8-203ENST00000563180 PPANQ9NQ55 473 aaKnown RBP16.78■□□□□ 0.28
IRF8-203ENST00000563180 FAM114A2Q9NRY5 505 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 IMP3Q9NV31 184 aaKnown RBP16.78■□□□□ 0.28
IRF8-203ENST00000563180 KCNK4Q9NYG8 393 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 VPS9D1Q9Y2B5 631 aa16.78■□□□□ 0.28
IRF8-203ENST00000563180 ESPNB1AK53 854 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 ZW10O43264 779 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 MTHFD1P11586 935 aaKnown RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 CCR7P32248 378 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 CARSP49589 748 aaKnown RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 CSE1LP55060 971 aaKnown RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 MPP1Q00013 466 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 RPA4Q13156 261 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 SPIDRQ14159 915 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 SYTL3Q4VX76 610 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 CTSL3PQ5NE16 218 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 CAPRIN2Q6IMN6 1127 aaKnown RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 TRMT10BQ6PF06 316 aaKnown RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 GABPB2Q8TAK5 448 aaPredicted RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 BIRC8Q96P09 236 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 OR52A5Q9H2C5 316 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 SLC40A1Q9NP59 571 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 ZDHHC18Q9NUE0 388 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 POT1Q9NUX5 634 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 ATXN7L1Q9ULK2 861 aaPredicted RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 CLCA2Q9UQC9 943 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 PCDHB1Q9Y5F3 818 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 COL27A1Q8IZC6 1860 aaPredicted RBP16.77■□□□□ 0.28
IRF8-203ENST00000563180 UNC13CQ8NB66 2214 aa16.77■□□□□ 0.28
IRF8-203ENST00000563180 IGHV1OR21-1A0A087WYE8 117 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 SLC5A10A0PJK1 596 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 HAUS5O94927 633 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 ESR1P03372 595 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 PKMP14618 531 aaKnown RBP16.77■□□□□ 0.27
IRF8-203ENST00000563180 CD1CP29017 333 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 PPM1FP49593 454 aaPredicted RBP16.77■□□□□ 0.27
IRF8-203ENST00000563180 TARDBPQ13148 414 aaKnown RBP eCLIP16.77■□□□□ 0.27
IRF8-203ENST00000563180 FRG1Q14331 258 aaKnown RBP16.77■□□□□ 0.27
IRF8-203ENST00000563180 NKAIN2Q5VXU1 208 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 DUS1LQ6P1R4 473 aaKnown RBP16.77■□□□□ 0.27
IRF8-203ENST00000563180 RBM44Q6ZP01 1051 aaKnown RBP16.77■□□□□ 0.27
IRF8-203ENST00000563180 CAPN12Q6ZSI9 719 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 TMEM26Q6ZUK4 368 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 USP53Q70EK8 1073 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 PALM2Q8IXS6 379 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 DCBLD1Q8N8Z6 715 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 C2CD4AQ8NCU7 369 aaPredicted RBP16.77■□□□□ 0.27
IRF8-203ENST00000563180 IFT81Q8WYA0 676 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 PANX3Q96QZ0 392 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 TBC1D10AQ9BXI6 508 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 FOXP3Q9BZS1 431 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 L2HGDHQ9H9P8 463 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 UCK1Q9HA47 277 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 ANGPTL2Q9UKU9 493 aa16.77■□□□□ 0.27
IRF8-203ENST00000563180 H3BMM5 538 aa16.76■□□□□ 0.27
IRF8-203ENST00000563180 IFRD1O00458 451 aaPredicted RBP16.76■□□□□ 0.27
IRF8-203ENST00000563180 NIPSNAP2O75323 286 aa16.76■□□□□ 0.27
IRF8-203ENST00000563180 CSO75390 466 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms