RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 ESAMQ96AP7 390 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PPM1MQ96MI6 270 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 CWH43Q9H720 699 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 GPN2Q9H9Y4 310 aaPredicted RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 MAGEE1Q9HCI5 957 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 CHCHD3Q9NX63 227 aaKnown RBP12.89□□□□□ -0.35
USB1-207ENST00000563149 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 PKP3Q9Y446 797 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 ASB1Q9Y576 335 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 SLC30A1Q9Y6M5 507 aa12.89□□□□□ -0.35
USB1-207ENST00000563149 BPTFQ12830 3046 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 A0A1B0GVM2 712 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 GSTA4O15217 222 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 INHBBP09529 407 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 ZNF12P17014 697 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 ZNF7P17097 686 aaPredicted RBP12.88□□□□□ -0.35
USB1-207ENST00000563149 NFKBIAP25963 317 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 GSTM2P28161 218 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 MTHFRP42898 656 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 RGS4P49798 205 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 HUNKP57058 714 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
USB1-207ENST00000563149 SELPLGQ14242 412 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 PYCR3Q53H96 274 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 OTUD3Q5T2D3 398 aaPredicted RBP12.88□□□□□ -0.35
USB1-207ENST00000563149 SULT1C3Q6IMI6 304 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 TMEM214Q6NUQ4 689 aaKnown RBP12.88□□□□□ -0.35
USB1-207ENST00000563149 RNF19BQ6ZMZ0 732 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 TAS2R42Q7RTR8 314 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 STK32CQ86UX6 486 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 ZNF555Q8NEP9 628 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 OR2T12Q8NG77 320 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 RAB2BQ8WUD1 216 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 SLC13A3Q8WWT9 602 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 LINC01599Q8WXQ3 324 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 CDK15Q96Q40 435 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 TMEM161AQ9NX61 479 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 LMCD1Q9NZU5 365 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 IL17CQ9P0M4 197 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 CCL27Q9Y4X3 112 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 OARD1Q9Y530 152 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
USB1-207ENST00000563149 PCDHGC4Q9Y5F7 938 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 VWA8A3KMH1 1905 aa12.88□□□□□ -0.35
USB1-207ENST00000563149 A0A1W2PPW3 197 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 G3V2T6 193 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 FFAR2O15552 330 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 VNN2O95498 520 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 IL6P05231 212 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 CKBP12277 381 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 IL1RNP18510 177 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 EEF1B2P24534 225 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 MAP4P27816 1152 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 ARL1P40616 181 aaPredicted RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 MTPNP58546 118 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 TRAF2Q12933 501 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 NFATC3Q12968 1075 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 TRAF3Q13114 568 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 NEDD8Q15843 81 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 SBSNQ6UWP8 590 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 EFHBQ8N7U6 833 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 PJA1Q8NG27 643 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 EXOC2Q96KP1 924 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 RPL10LQ96L21 214 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 RBM4BQ9BQ04 359 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 RBM4Q9BWF3 364 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 OSBPL10Q9BXB5 764 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 FAM126AQ9BYI3 521 aaPredicted RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 GPR62Q9BZJ7 368 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 PAIP1Q9H074 479 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 CRISPLD1Q9H336 500 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 PIF1Q9H611 641 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 MAGIXQ9H6Y5 334 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 ELAC1Q9H777 363 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 IPPKQ9H8X2 491 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 SARS2Q9NP81 518 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 TRMT13Q9NUP7 481 aaKnown RBP12.87□□□□□ -0.35
USB1-207ENST00000563149 RHBDL2Q9NX52 303 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 NEUROG3Q9Y4Z2 214 aa12.87□□□□□ -0.35
USB1-207ENST00000563149 ELOVL7A1L3X0 281 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 FZD6O60353 706 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 MT-ND1P03886 318 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ALDH2P05091 517 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 SLC2A4P14672 509 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 CRHBPP24387 322 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ELK4P28324 431 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 CTGFP29279 349 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 SHMT2P34897 504 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 C21orf59P57076 290 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 RPS24P62847 133 aaKnown RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 CYP4F3Q08477 520 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 DUSP4Q13115 394 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms