RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 ADGRE3Q9BY15 652 aa8.1□□□□□ -1.11
CKLF-208ENST00000563092 ILKAPQ9H0C8 392 aaPredicted RBP8.1□□□□□ -1.11
CKLF-208ENST00000563092 CLSTN2Q9H4D0 955 aa8.1□□□□□ -1.11
CKLF-208ENST00000563092 ZBTB20Q9HC78 741 aaPredicted RBP8.1□□□□□ -1.11
CKLF-208ENST00000563092 MYO6Q9UM54 1294 aa8.1□□□□□ -1.11
CKLF-208ENST00000563092 UBA6A0AVT1 1052 aaPredicted RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 LGALS16A8MUM7 142 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 ZG16O60844 167 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 MTX2O75431 263 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 LCA5LO95447 670 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 FTLP02792 175 aaPredicted RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 MTHFD1P11586 935 aaKnown RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 CD46P15529 392 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 VCLP18206 1134 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 PTGER4P35408 488 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 HALP42357 657 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 TMEM115Q12893 351 aaPredicted RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 ART3Q13508 389 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 RAPSNQ13702 412 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 SSPNQ14714 243 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 LLGL1Q15334 1064 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 SLC14A2Q15849 920 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 IFI16Q16666 785 aaKnown RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 ZXDCQ2QGD7 858 aaPredicted RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 ANO6Q4KMQ2 910 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 CCDC183Q5T5S1 534 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 LYPLAL1Q5VWZ2 237 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 ALS2CLQ60I27 953 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 METRNLQ641Q3 311 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 FAM83HQ6ZRV2 1179 aaPredicted RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 ZC3H18Q86VM9 953 aaKnown RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 RAB43Q86YS6 212 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 OR1L3Q8NH93 324 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 HSPH1Q92598 858 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 RELTQ969Z4 430 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 LURAP1Q96LR2 239 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 FER1L6-AS2Q96M78 137 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 PPM1MQ96MI6 270 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 SLX1AQ9BQ83 275 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 PITPNM3Q9BZ71 974 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 KIR3DX1Q9H7L2 352 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 AGPAT4Q9NRZ5 378 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 HAUS2Q9NVX0 235 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 HRASLS2Q9NWW9 162 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 LIMA1Q9UHB6 759 aaKnown RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 POMT2Q9UKY4 750 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 KLF2Q9Y5W3 355 aaPredicted RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 DNMT3AQ9Y6K1 912 aaPredicted RBP8.09□□□□□ -1.11
CKLF-208ENST00000563092 SCINQ9Y6U3 715 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.11
CKLF-208ENST00000563092 A0A1B0GUH1 482 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 DDX3XO00571 662 aaKnown RBP eCLIP8.08□□□□□ -1.122e-6■■□□□ 11.6
CKLF-208ENST00000563092 IGHEP01854 428 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 CD48P09326 243 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 CCDC172P0C7W6 258 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 MYBL1P10243 752 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 PRKCIP41743 596 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 CD86P42081 329 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 TSFMP43897 325 aaKnown RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 ARL4DP49703 201 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 CTSCP53634 463 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 IFI35P80217 286 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 ADCY2Q08462 1091 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 SLC10A2Q12908 348 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 DPYSL3Q14195 570 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 GALNT3Q14435 633 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 PIGHQ14442 188 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 BECN1Q14457 450 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 NAA30Q147X3 362 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 ATP13A5Q4VNC0 1218 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 TMTC4Q5T4D3 741 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 ZNF324BQ6AW86 544 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 SPNS3Q6ZMD2 512 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 ZNF571Q7Z3V5 609 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 PPP1R32Q7Z5V6 425 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 AMZ2Q86W34 360 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 OOSP2Q86WS3 158 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 ZADH2Q8N4Q0 377 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.08□□□□□ -1.12
CKLF-208ENST00000563092 RASGEF1AQ8N9B8 481 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 CLEC1AQ8NC01 280 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 BRSK1Q8TDC3 778 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 PPP4R1Q8TF05 950 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 COG1Q8WTW3 980 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 FAR1Q8WVX9 515 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 TM9SF4Q92544 642 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 HPS1Q92902 700 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 NACC2Q96BF6 587 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 FAF2Q96CS3 445 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 HDAC11Q96DB2 347 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 CLIP3Q96DZ5 547 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 IMP4Q96G21 291 aaKnown RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 INSM2Q96T92 566 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 USB1Q9BQ65 265 aaKnown RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 WDR77Q9BQA1 342 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 TLR10Q9BXR5 811 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 ISCUQ9H1K1 167 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 RUBCNLQ9H714 662 aa8.08□□□□□ -1.12
CKLF-208ENST00000563092 ACTR5Q9H9F9 607 aaPredicted RBP8.08□□□□□ -1.12
CKLF-208ENST00000563092 C1GALT1Q9NS00 363 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms