RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ARMC7Q9H6L4 198 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 ARNT2Q9HBZ2 717 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CCDC177Q9NQR7 707 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 SH3BP4Q9P0V3 963 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TEKT2Q9UIF3 430 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 NFS1Q9Y697 457 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 FYNP06241 537 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 SP100P23497 879 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 GNPDA1P46926 289 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 NRLP54845 237 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 MED21Q13503 144 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CHRNA6Q15825 494 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 TAS1R1Q7RTX1 841 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 CBARPQ8N350 705 aaPredicted RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 SPPL3Q8TCT6 385 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 LINC01599Q8WXQ3 324 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 NMD3Q96D46 503 aaKnown RBP7.45□□□□□ -1.22
TCF4-216ENST00000562680 SNX5Q9Y5X3 404 aa7.45□□□□□ -1.22
TCF4-216ENST00000562680 KPNA4O00629 521 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 KAT7O95251 611 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 OAS1P00973 400 aaKnown RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 PROCP04070 461 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 UBTFL6P0CB48 400 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 COX4I1P13073 169 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 SERPINB1P30740 379 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 HMGCLP35914 325 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 LRRC74AQ0VAA2 488 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ARL13AQ5H913 290 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 PPM1JQ5JR12 505 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ATAD3BQ5T9A4 648 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 LRRC70Q7Z2Q7 622 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 LIMS2Q7Z4I7 341 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CDH24Q86UP0 819 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 TRAM1L1Q8N609 369 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ZNF555Q8NEP9 628 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 TMEM237Q96Q45 408 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 KCTD14Q9BQ13 255 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 SLC12A4Q9UP95 1085 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 LINC01553A4QN01 128 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 HTR3EA5X5Y0 456 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 GNB5O14775 395 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 MUSKO15146 869 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 DEAF1O75398 565 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 AHSGP02765 367 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 PRPS2P11908 318 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 IMPDH1P20839 514 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 HNF4AP41235 474 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 BNIP2Q12982 314 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 PLEKHS1Q5SXH7 462 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 LRRC66Q68CR7 880 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CYP20A1Q6UW02 462 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 B3GNT6Q6ZMB0 384 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 LRRTM4Q86VH4 590 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CYP4Z1Q86W10 505 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 MMAAQ8IVH4 418 aaKnown RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 ARHGAP12Q8IWW6 846 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CYB5D2Q8WUJ1 264 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CCM2Q9BSQ5 444 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 RIOK2Q9BVS4 552 aaKnown RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 TIMMDC1Q9NPL8 285 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 TBCCD1Q9NVR7 557 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 OXSMQ9NWU1 459 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 KLHL28Q9NXS3 571 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CCDC167Q9P0B6 97 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ZNF229Q9UJW7 825 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 PCDHGA11Q9Y5H2 935 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 C16orf96A6NNT2 1141 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 PSMD11O00231 422 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 SEC24DO94855 1032 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 EPN2O95208 641 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 KCNH1O95259 989 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 MT-CO1P00395 513 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 VIPP01282 170 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 F11P03951 625 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 COX7A2P14406 83 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 LDB1Q86U70 411 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 UNC5BQ8IZJ1 945 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CNTD1Q8N815 330 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 VN1R2Q8NFZ6 395 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 BBS4Q96RK4 519 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 HERPUD2Q9BSE4 406 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 EFCAB11Q9BUY7 163 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 BTBD1Q9H0C5 482 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 PRKAG3Q9UGI9 489 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ENOPH1Q9UHY7 261 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 HCFC2Q9Y5Z7 792 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ISM1B1AKI9 464 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 STX16-NPEPL1H3BU86 382 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 K7EPI3 171 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 CCL22O00626 93 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 STX16O14662 325 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ADAM12O43184 909 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 RECQL5O94762 991 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 PCCBP05166 539 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ATP1B2P14415 290 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 GNAZP19086 355 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 ELF3P78545 371 aaPredicted RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 SEMA3BQ13214 749 aa7.44□□□□□ -1.22
TCF4-216ENST00000562680 TSNQ15631 228 aaKnown RBP7.44□□□□□ -1.22
TCF4-216ENST00000562680 ADRM1Q16186 407 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms