RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ZNF470Q6ECI4 717 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 CAPRIN2Q6IMN6 1127 aaKnown RBP16.36■□□□□ 0.21
CLK3-207ENST00000562389 TMEM26Q6ZUK4 368 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 CENPUQ71F23 418 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 CTAGE6Q86UF2 777 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 KCNMB4Q86W47 210 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 ZNF761Q86XN6 746 aaPredicted RBP16.36■□□□□ 0.21
CLK3-207ENST00000562389 MARCH9Q86YJ5 346 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 CTAGE4Q8IX94 777 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 ELMO1Q92556 727 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 LPGAT1Q92604 370 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 ART4Q93070 314 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 RMDN2Q96LZ7 410 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 FAM167BQ9BTA0 163 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 LRRC1Q9BTT6 524 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 OR52A5Q9H2C5 316 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 SLC40A1Q9NP59 571 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 INTS10Q9NVR2 710 aaKnown RBP16.36■□□□□ 0.21
CLK3-207ENST00000562389 CHMP2BQ9UQN3 213 aa16.36■□□□□ 0.21
CLK3-207ENST00000562389 UBA6A0AVT1 1052 aaPredicted RBP16.35■□□□□ 0.21
CLK3-207ENST00000562389 SLC5A10A0PJK1 596 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 CPNE6O95741 557 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 CD1CP29017 333 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 CD151P48509 253 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 EIF3BP55884 814 aaKnown RBP16.35■□□□□ 0.21
CLK3-207ENST00000562389 PLOD1Q02809 727 aaPredicted RBP16.35■□□□□ 0.21
CLK3-207ENST00000562389 CAV1Q03135 178 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 PDIA2Q13087 525 aaKnown RBP16.35■□□□□ 0.21
CLK3-207ENST00000562389 CAMK2BQ13554 666 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 ISXQ2M1V0 245 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 ZNF449Q6P9G9 518 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 UNC5AQ6ZN44 842 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 CEP112Q8N8E3 955 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 OR10G6Q8NH81 332 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 LKAAEAR1Q8TD35 194 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 SEC14L1Q92503 715 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 C12orf66Q96MD2 445 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 BIRC8Q96P09 236 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 PANX3Q96QZ0 392 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 INSM2Q96T92 566 aaPredicted RBP16.35■□□□□ 0.21
CLK3-207ENST00000562389 DPYSL5Q9BPU6 564 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 PHACTR1Q9C0D0 580 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 EPB41L1Q9H4G0 881 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 PLAC1Q9HBJ0 212 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 EPB41L5Q9HCM4 733 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 ZC3H7BQ9UGR2 993 aaKnown RBP16.35■□□□□ 0.21
CLK3-207ENST00000562389 ATXN7L1Q9ULK2 861 aaPredicted RBP16.35■□□□□ 0.21
CLK3-207ENST00000562389 PCDHB1Q9Y5F3 818 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 HEBP2Q9Y5Z4 205 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 KNTC1P50748 2209 aa16.35■□□□□ 0.21
CLK3-207ENST00000562389 EIF3HO15372 352 aaKnown RBP eCLIP16.34■□□□□ 0.21
CLK3-207ENST00000562389 DUX1O43812 170 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 S1PR4O95977 384 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 ESR1P03372 595 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 SLC1A2P43004 574 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 PREPP48147 710 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 SLC7A5Q01650 507 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 BOP1Q14137 746 aaKnown RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 FRG1Q14331 258 aaKnown RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 AMZ1Q400G9 498 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 MAP9Q49MG5 647 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 SYTL3Q4VX76 610 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 HSP90AA5PQ58FG0 334 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 CTSL3PQ5NE16 218 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 HP1BP3Q5SSJ5 553 aaPredicted RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 PTRHD1Q6GMV3 140 aaKnown RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 PDZD3Q86UT5 571 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 DENND6AQ8IWF6 608 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 CNTN4Q8IWV2 1026 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 UNC5BQ8IZJ1 945 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 NOA1Q8NC60 698 aaKnown RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 FBXO36Q8NEA4 188 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 SPDYE1Q8NFV5 336 aaPredicted RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 GATA6Q92908 595 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 CERS2Q96G23 380 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 CFAP36Q96G28 342 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 AHCYL2Q96HN2 611 aaKnown RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 TMEM121BQ9BXQ6 578 aaPredicted RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 IMP3Q9NV31 184 aaKnown RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 ENTPD2Q9Y5L3 495 aa16.34■□□□□ 0.21
CLK3-207ENST00000562389 CFAP20Q9Y6A4 193 aaKnown RBP16.34■□□□□ 0.21
CLK3-207ENST00000562389 PRAMEF33A0A0G2JMD5 474 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 IQCF5A8MTL0 148 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 BHMG1C9JSJ3 638 aaPredicted RBP16.33■□□□□ 0.2
CLK3-207ENST00000562389 H3BMM5 538 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 TMX2-CTNND1H3BSU7 103 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 IFRD1O00458 451 aaPredicted RBP16.33■□□□□ 0.2
CLK3-207ENST00000562389 ITGB6P18564 788 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 NDUFS1P28331 727 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 PDHA2P29803 388 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 FMO4P31512 558 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 CCKBRP32239 447 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 CCR7P32248 378 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 CSF2RBP32927 897 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 CTBP1Q13363 440 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 GPR18Q14330 331 aa16.33■□□□□ 0.2
CLK3-207ENST00000562389 FASTKD3Q14CZ7 662 aaKnown RBP16.33■□□□□ 0.2
CLK3-207ENST00000562389 GLE1Q53GS7 698 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms