RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 DOPEY2Q9Y3R5 2298 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SCRG1O75711 98 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SRP72O76094 671 aaKnown RBP16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 LPOP22079 712 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 PTPN4P29074 926 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ARCN1P48444 511 aaKnown RBP16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ARL4DP49703 201 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 KPNA2P52292 529 aaKnown RBP16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TUBB4BP68371 445 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 IL10RAQ13651 578 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TUBB2AQ13885 445 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TAF1AQ15573 450 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 UGT8Q16880 541 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 BCL7AQ4VC05 210 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CPZQ66K79 652 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FBXO38Q6PIJ6 1188 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CNGA4Q8IV77 575 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 LILRA3Q8N6C8 439 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SLC38A9Q8NBW4 561 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 OR4K2Q8NGD2 314 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ZNF501Q96CX3 271 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TUBB2BQ9BVA1 445 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 HEMGNQ9BXL5 484 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ASB8Q9H765 288 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 KIR3DX1Q9H7L2 352 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FKBPLQ9UIM3 349 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ACSL5Q9ULC5 683 aa16.28■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 LRRK2Q5S007 2527 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 NBPF19A0A087WUL8 3843 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 OR6C74A6NCV1 312 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 AGAP14A8MT82 685 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 AKR1B15C9JRZ8 316 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 APOC4-APOC2K7ER74 178 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CPNE3O75131 537 aaKnown RBP16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ZBTB11O95625 1053 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 APOC2P02655 101 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SLC35G4P0C7Q5 338 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ADRA1AP35348 466 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MAGEA1P43355 309 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 GEMP55040 296 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 XIAPP98170 497 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 GPS2Q13227 327 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MSLNQ13421 630 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CAPRIN2Q6IMN6 1127 aaKnown RBP16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RANBP10Q6VN20 620 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ZNF517Q6ZMY9 492 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 DAAM2Q86T65 1068 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TMEM126BQ8IUX1 230 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ZFPM2Q8WW38 1151 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 LINC00615Q96LM1 132 aaPredicted RBP16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 APOL2Q9BQE5 337 aa16.27■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TNRC6AQ8NDV7 1962 aaKnown RBP16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 C2orf81A6NN90 581 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 H7C0C1 242 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 DDX3YO15523 660 aaKnown RBP16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ANXA9O76027 345 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 LCA5LO95447 670 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 POLBP06746 335 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ATP5OP48047 213 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CHAF1BQ13112 559 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PRAMEF17Q5VTA0 474 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 C11orf63Q6NUN7 778 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SYVN1Q86TM6 617 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CARFQ8N187 725 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 FAM26EQ8N5C1 309 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 OR13C4Q8NGS5 318 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 THAP4Q8WY91 577 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SEC14L1Q92503 715 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 RBM41Q96IZ5 413 aaKnown RBP16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 KCND1Q9NSA2 647 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 BTRCQ9Y297 605 aa16.26■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 KLHL33A6NCF5 533 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 C5orf60A6NFR6 353 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 POLR2CP19387 275 aaPredicted RBP16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PSMB4P28070 264 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 PRLHRP49683 370 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 RPS15P62841 145 aaKnown RBP16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ABRQ12979 859 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 IZUMO3Q5VZ72 239 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ITPRIPL1Q6GPH6 555 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 LCN10Q6JVE6 187 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ARMC6Q6NXE6 501 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 MICALCLQ6ZW33 695 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CFAP206Q8IYR0 622 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 TC2NQ8N9U0 490 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 RNF214Q8ND24 703 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 OR4E2Q8NGC2 313 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 ACTL9Q8TC94 416 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 MR1Q95460 341 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 NRTNQ99748 197 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 TLR10Q9BXR5 811 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 CHST8Q9H2A9 424 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 FAM96AQ9H5X1 160 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 LATS2Q9NRM7 1088 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SOHLH2Q9NX45 425 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 POMT2Q9UKY4 750 aa16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 FARSAQ9Y285 508 aaKnown RBP16.25■□□□□ 0.19
VPS9D1-AS1-201ENST00000562298 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms