RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 RIMKLBQ9ULI2 386 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 PKP3Q9Y446 797 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 ZNF711Q9Y462 761 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 PRKAB1Q9Y478 270 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 LOXL2Q9Y4K0 774 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 ARL5AQ9Y689 179 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 NFS1Q9Y697 457 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 FAM169AQ9Y6X4 670 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 COL27A1Q8IZC6 1860 aaPredicted RBP9.48□□□□□ -0.89
NIP7-203ENST00000562131 MGAQ8IWI9 3026 aa9.48□□□□□ -0.89
NIP7-203ENST00000562131 ZCWPW2A0A1B0GU75 182 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 TEX51A0A1B0GUA7 166 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 TLDC2A0PJX2 215 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PPM1DO15297 605 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 RGS16O15492 202 aaPredicted RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 CDH16O75309 829 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PYGLP06737 847 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 INHBAP08476 426 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 ITGA2BP08514 1039 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 ITIH1P19827 911 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 LPOP22079 712 aaPredicted RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 ATP5DP30049 168 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 SLC5A2P31639 672 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 CCKBRP32239 447 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 HADHAP40939 763 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 MSH2P43246 934 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 SLCO1A2P46721 670 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 SPINT3P49223 89 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PPM1FP49593 454 aaPredicted RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 MAPK10P53779 464 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 UCNP55089 124 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 ZFP36L1Q07352 338 aaKnown RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 PEX6Q13608 980 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 THOC5Q13769 683 aaKnown RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 KBTBD12Q3ZCT8 623 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PYCR3Q53H96 274 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 NKAIN2Q5VXU1 208 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 TRMT10BQ6PF06 316 aaKnown RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 CYS1Q717R9 158 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 TAOK1Q7L7X3 1001 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 CHST15Q7LFX5 561 aaPredicted RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 LYSMD3Q7Z3D4 306 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 MTERF4Q7Z6M4 381 aaKnown RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 CLEC14AQ86T13 490 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PIM3Q86V86 326 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 LRRC6Q86X45 466 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 C17orf82Q86X59 251 aaPredicted RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 NAGSQ8N159 534 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PPM1NQ8N819 430 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 CALML6Q8TD86 181 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 SLC39A7Q92504 469 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 MRRFQ96E11 262 aaKnown RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 SCARF2Q96GP6 870 aaPredicted RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 COX14Q96I36 57 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 LYSMD1Q96S90 227 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PAFAH2Q99487 392 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 NUDT22Q9BRQ3 303 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 FAM167BQ9BTA0 163 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 TMEM109Q9BVC6 243 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PLAC1Q9HBJ0 212 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 MED4Q9NPJ6 270 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 TREX1Q9NSU2 369 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 NSMCE4AQ9NXX6 385 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 PKD2L2Q9NZM6 624 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 CNOT6Q9ULM6 557 aaKnown RBP9.47□□□□□ -0.89
NIP7-203ENST00000562131 SPO11Q9Y5K1 396 aa9.47□□□□□ -0.89
NIP7-203ENST00000562131 KIF26BQ2KJY2 2108 aa9.46□□□□□ -0.89
NIP7-203ENST00000562131 ATMQ13315 3056 aa9.46□□□□□ -0.89
NIP7-203ENST00000562131 MROH6A6NGR9 719 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 FAM159BA6NKW6 160 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 FADS2P1A8MWK0 482 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 GOLGA8KD6RF30 607 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 AGPSO00116 658 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 ATXN7O15265 892 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 STX7O15400 261 aaKnown RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 ZW10O43264 779 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 LDB2O43679 373 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 VAPBO95292 243 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 CPNE6O95741 557 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 ERVK-10P10266 1014 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 MPSTP25325 297 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 CD1CP29017 333 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 MLLT3P42568 568 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 ZNF140P52738 457 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 TMPRSS15P98073 1019 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 VAC14Q08AM6 782 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 CLN3Q13286 438 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 MSLNQ13421 630 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 C16orf72Q14CZ0 275 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 TMED2Q15363 201 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 TGIF1Q15583 401 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 TAF1BQ53T94 588 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 ZNF648Q5T619 568 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 HENMT1Q5T8I9 393 aaKnown RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 AFTPHQ6ULP2 937 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 ZNF574Q6ZN55 896 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 ZNF761Q86XN6 746 aaPredicted RBP9.46□□□□□ -0.9
NIP7-203ENST00000562131 TDRPQ86YL5 185 aa9.46□□□□□ -0.9
NIP7-203ENST00000562131 SLITRK4Q8IW52 837 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms