RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 DPM1O60762 260 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 SEMA7AO75326 666 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 KRT1P04264 644 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 CA5AP35218 305 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 PTGIRP43119 386 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 WASHC5Q12768 1159 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 NOMO1Q15155 1222 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 INPP5JQ15735 1006 aaPredicted RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 PLEKHS1Q5SXH7 462 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 HIST2H2BCQ6DN03 193 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 ARMC6Q6NXE6 501 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 JMJD6Q6NYC1 403 aaPredicted RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 B4GALNT4Q76KP1 1039 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 DSELQ8IZU8 1212 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 OR2L2Q8NH16 312 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 TFB1MQ8WVM0 346 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 CPT1BQ92523 772 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 MRGPRX2Q96LB1 330 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 FCRL5Q96RD9 977 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 NLNQ9BYT8 704 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 WWP1Q9H0M0 922 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 KIR3DX1Q9H7L2 352 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 IMPACTQ9P2X3 320 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 G3BP2Q9UN86 482 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 PKP3Q9Y446 797 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 CFAP20Q9Y6A4 193 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 ESPL1Q14674 2120 aa11.53□□□□□ -0.56
CARMIL3-204ENST00000561354 SHANK1Q9Y566 2161 aa11.52□□□□□ -0.56
CARMIL3-204ENST00000561354 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 MATN2O00339 956 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 TMEM63AO94886 807 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 DDAH2O95865 285 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 MSL3P1P0C860 447 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 PYGMP11217 842 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 NFKB1P19838 968 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 HLA-DPA1P20036 260 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 MSH3P20585 1137 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 NDUFS1P28331 727 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 RORAP35398 523 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 SLC1A1P43005 524 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 CHRNA4P43681 627 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 KPNA2P52292 529 aaKnown RBP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 DYNLT1P63172 113 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 TFDP2Q14188 446 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 SLC1A5Q15758 541 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 TAZQ16635 292 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 ODF2Q5BJF6 829 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 FNBP1LQ5T0N5 605 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 MED25Q71SY5 747 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 GLT6D1Q7Z4J2 308 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 RHOT2Q8IXI1 618 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 RHOT1Q8IXI2 618 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 SLC25A41Q8N5S1 370 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 ENDOVQ8N8Q3 282 aaKnown RBP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 TMEM102Q8N9M5 508 aaPredicted RBP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 Q8NA96 180 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 GLIS1Q8NBF1 620 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 FDCSPQ8NFU4 85 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 ZNF398Q8TD17 642 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 BLOC1S5Q8TDH9 187 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 OXNAD1Q96HP4 312 aaPredicted RBP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 LINC00615Q96LM1 132 aaPredicted RBP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 C12orf66Q96MD2 445 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 VAT1Q99536 393 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 SLC29A3Q9BZD2 475 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 FANCEQ9HB96 536 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 C1GALT1Q9NS00 363 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 SOHLH2Q9NX45 425 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 TCFL5Q9UL49 500 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 SNX7Q9UNH6 387 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 COLEC10Q9Y6Z7 277 aa11.52□□□□□ -0.57
CARMIL3-204ENST00000561354 TCP11X1B4DZS4 312 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 CAPN1P07384 714 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 SLC35G4P0C7Q5 338 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 RNF224P0DH78 156 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 PBLDP30039 288 aaPredicted RBP11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 AKT1P31749 480 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 CDKN2BP42772 138 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 VAV2P52735 878 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 PRKAA1Q13131 559 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 MPP3Q13368 585 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 BCL7AQ4VC05 210 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 ZNF789Q5FWF6 425 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 PRAMEF17Q5VTA0 474 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 LCN10Q6JVE6 187 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 DUS1LQ6P1R4 473 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 MFSD7Q6UXD7 560 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 PID1Q7Z2X4 250 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 CLIP3Q96DZ5 547 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 PPM1MQ96MI6 270 aa11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 SMAD5Q99717 465 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-204ENST00000561354 CCM2Q9BSQ5 444 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms