RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 WDR83Q9BRX9 315 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 SLC39A3Q9BRY0 314 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 NTPCRQ9BSD7 190 aaKnown RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 SYT17Q9BSW7 474 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 MTG1Q9BT17 334 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 ABHD6Q9BV23 337 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ALG8Q9BVK2 526 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ALOXE3Q9BYJ1 711 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 PRRG4Q9BZD6 226 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 IRX2Q9BZI1 471 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 TMEM39BQ9GZU3 492 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 RAB33BQ9H082 229 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CDT1Q9H211 546 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 P2RY12Q9H244 342 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 FOXP1Q9H334 677 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 PIGMQ9H3S5 423 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 XKR8Q9H6D3 395 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ACTR5Q9H9F9 607 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 TBC1D17Q9HA65 648 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CRLF2Q9HC73 371 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 GALNT9Q9HCQ5 603 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 CHRAC1Q9NRG0 131 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SLC22A11Q9NSA0 550 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 AGPAT5Q9NUQ2 364 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 PRMT7Q9NVM4 692 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 SMPD3Q9NY59 655 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 SLCO1C1Q9NYB5 712 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 EHD3Q9NZN3 535 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 TRPM5Q9NZQ8 1165 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 TXNDC16Q9P2K2 825 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 THEGQ9P2T0 379 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 HSFX1Q9UBD0 423 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 HECAQ9UBI9 543 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 STK39Q9UEW8 545 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 OR14J1Q9UGF5 321 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 FBXO4Q9UKT5 387 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 DNPEPQ9ULA0 475 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 KCNJ14Q9UNX9 436 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SH2B3Q9UQQ2 575 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 ENTPD4Q9Y227 616 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 KCNK6Q9Y257 313 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 PLEKHA6Q9Y2H5 1048 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 SIRT4Q9Y6E7 314 aaPredicted RBP2.01□□□□□ -2.09
RTF1-207ENST00000561076 TEX264Q9Y6I9 313 aa2.01□□□□□ -2.09
RTF1-207ENST00000561076 UBE4BO95155 1302 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TTC41PQ6P2S7 1318 aa2□□□□□ -2.09
RTF1-207ENST00000561076 C11orf97A0A1B0GVM6 126 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ILVBLA1L0T0 632 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PIPSLA2A3N6 862 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PMS2P1A4D2B8 440 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GOLGA8OA6NCC3 632 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TRIM49BA6NDI0 452 aa2□□□□□ -2.09
RTF1-207ENST00000561076 C5orf51A6NDU8 294 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZSCAN5CA6NGD5 496 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 DUXAA6NLW8 204 aa2□□□□□ -2.09
RTF1-207ENST00000561076 HSPB2A8KAH6 182 aa2□□□□□ -2.09
RTF1-207ENST00000561076 KLRF2D3W0D1 207 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GOLGA8NF8WBI6 632 aa2□□□□□ -2.09
RTF1-207ENST00000561076 F8WDY8 70 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TRIM77I1YAP6 450 aa2□□□□□ -2.09
RTF1-207ENST00000561076 K7EQM0 130 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TLR4O00206 839 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CYR61O00622 381 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SOCS6O14544 535 aa2□□□□□ -2.09
RTF1-207ENST00000561076 VCYO14598 125 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PPEF2O14830 753 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CETN3O15182 167 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CASC3O15234 703 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 NVLO15381 856 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 CYP27B1O15528 508 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RNMTO43148 476 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 AP5Z1O43299 807 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZNF208O43345 1280 aa2□□□□□ -2.09
RTF1-207ENST00000561076 B4GALT4O60513 344 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PEX10O60683 326 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TBX19O60806 448 aa2□□□□□ -2.09
RTF1-207ENST00000561076 FCGR3BO75015 233 aa2□□□□□ -2.09
RTF1-207ENST00000561076 VPS26AO75436 327 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RNF8O76064 485 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DDNO94850 711 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 SCAF4O95104 1147 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ACSL3O95573 720 aa2□□□□□ -2.09
RTF1-207ENST00000561076 BAG3O95817 575 aa2□□□□□ -2.09
RTF1-207ENST00000561076 YES1P07947 543 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SFTPBP07988 381 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GSTA2P09210 222 aa2□□□□□ -2.09
RTF1-207ENST00000561076 INHBBP09529 407 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RAB40ALP0C0E4 278 aa2□□□□□ -2.09
RTF1-207ENST00000561076 UBTFL6P0CB48 400 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 STAG3L1P0CL83 205 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CBSLP0DN79 551 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TROVE2P10155 538 aaKnown RBP eCLIP2□□□□□ -2.09
RTF1-207ENST00000561076 RRASP10301 218 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DLATP10515 647 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 SAGP10523 405 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 RALBP11234 206 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ANXA8P13928 327 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PPP3CBP16298 524 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ENGP17813 658 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CR2P20023 1033 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms