RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ARNT2Q9HBZ2 717 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 ZNF71Q9NQZ8 489 aaPredicted RBP15.84■□□□□ 0.13
SNX1-213ENST00000561026 HRASLS2Q9NWW9 162 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 SLC24A2Q9UI40 661 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 KCND3Q9UK17 655 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 RARRES3Q9UL19 164 aa15.84■□□□□ 0.13
SNX1-213ENST00000561026 REXO2Q9Y3B8 237 aaKnown RBP15.84■□□□□ 0.13
SNX1-213ENST00000561026 KATNA1O75449 491 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 TIAF1O95411 115 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 MT-ND3P03897 115 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 PYGMP11217 842 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 CETN2P41208 172 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 ZNF75DP51815 510 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 ZNF140P52738 457 aaPredicted RBP15.83■□□□□ 0.12
SNX1-213ENST00000561026 ACY1Q03154 408 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 TLE1Q04724 770 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 ERV3-1Q14264 604 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.12
SNX1-213ENST00000561026 PWWP2BQ6NUJ5 590 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 AADACL2Q6P093 401 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 DUS1LQ6P1R4 473 aaKnown RBP15.83■□□□□ 0.12
SNX1-213ENST00000561026 LRRC57Q8N9N7 239 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 ULK4Q96C45 1275 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 DCUN1D1Q96GG9 259 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 MRFAP1L1Q96HT8 127 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 LACRTQ9GZZ8 138 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 KIR3DX1Q9H7L2 352 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 CRLS1Q9UJA2 301 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 PCDHGA6Q9Y5G7 932 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 KCNMB2Q9Y691 235 aa15.83■□□□□ 0.12
SNX1-213ENST00000561026 ZNF106Q9H2Y7 1883 aaKnown RBP15.83■□□□□ 0.12
SNX1-213ENST00000561026 HECTD1Q9ULT8 2610 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 UBA6A0AVT1 1052 aaPredicted RBP15.82■□□□□ 0.12
SNX1-213ENST00000561026 TLCD2A6NGC4 264 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 RECKO95980 971 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 POLBP06746 335 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 SLC35G4P0C7Q5 338 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 EBLN1P0CF75 366 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 RALBP11234 206 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 HADHAP40939 763 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 ARL4DP49703 201 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 HSD11B2P80365 405 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 SEPT6Q14141 434 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 SPARCL1Q14515 664 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 CAPRIN2Q6IMN6 1127 aaKnown RBP15.82■□□□□ 0.12
SNX1-213ENST00000561026 RAD9BQ6WBX8 426 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 CERS6Q6ZMG9 384 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 OOSP2Q86WS3 158 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 KLHDC8BQ8IXV7 354 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 CFAP206Q8IYR0 622 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 NXPE1Q8N323 547 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 D2HGDHQ8N465 521 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 HEXDCQ8WVB3 486 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 COPS8Q99627 209 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 TBL1YQ9BQ87 522 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 CCM2Q9BSQ5 444 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 LHX9Q9NQ69 397 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 FGF21Q9NSA1 209 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 FAM8A1Q9UBU6 413 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 FEZ2Q9UHY8 353 aaPredicted RBP15.82■□□□□ 0.12
SNX1-213ENST00000561026 ANAPC2Q9UJX6 822 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 COLEC10Q9Y6Z7 277 aa15.82■□□□□ 0.12
SNX1-213ENST00000561026 COL12A1Q99715 3063 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 GRID2IPA4D2P6 1211 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 OR6C74A6NCV1 312 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 C21orf140B9A014 251 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 LDB2O43679 373 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 CREG1O75629 220 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 ZNF189O75820 626 aaPredicted RBP15.81■□□□□ 0.12
SNX1-213ENST00000561026 FURINP09958 794 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 ATP1B2P14415 290 aaPredicted RBP15.81■□□□□ 0.12
SNX1-213ENST00000561026 ITGALP20701 1170 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 PRLHRP49683 370 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 TMPRSS15P98073 1019 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 DNASE1L3Q13609 305 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 GSE1Q14687 1217 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 SKIDA1Q1XH10 827 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 ARMC6Q6NXE6 501 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 SNX20Q7Z614 316 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 CARFQ8N187 725 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 LILRA3Q8N6C8 439 aaPredicted RBP15.81■□□□□ 0.12
SNX1-213ENST00000561026 CT55Q8WUE5 264 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 RMDN2Q96LZ7 410 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 EPN3Q9H201 632 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 FAM96AQ9H5X1 160 aa15.81■□□□□ 0.12
SNX1-213ENST00000561026 C17orf113A0A1B0GUU1 675 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 PIPSLA2A3N6 862 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 CFAP99D6REC4 459 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 ZBTB11O95625 1053 aaPredicted RBP15.8■□□□□ 0.12
SNX1-213ENST00000561026 NTRK1P04629 796 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 NDUFS1P28331 727 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 CASRP41180 1078 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 VAV2P52735 878 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 TUBB4BP68371 445 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 TUBB2AQ13885 445 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 KRT33BQ14525 404 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 PARP6Q2NL67 630 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 GPR33Q49SQ1 333 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 KCTD11Q693B1 232 aa15.8■□□□□ 0.12
SNX1-213ENST00000561026 HM13Q8TCT9 377 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms