RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SLC12A9Q9BXP2 914 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 ZDHHC4Q9NPG8 344 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 TRPV5Q9NQA5 729 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 ST14Q9Y5Y6 855 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 COPG1Q9Y678 874 aaKnown RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 SZT2Q5T011 3432 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 DENND4AQ7Z401 1863 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 XIRP2A4UGR9 3374 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 TMEM265A0A087WTH1 108 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 GFYI3L273 518 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 PLK4O00444 970 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 MMP20O60882 483 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 SLCO2B1O94956 709 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 UROSP10746 265 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 THRAP10827 490 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 COX4I1P13073 169 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 ATP4BP51164 291 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 HSPA14Q0VDF9 509 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 CST6Q15828 149 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 GPRIN3Q6ZVF9 776 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 PARP9Q8IXQ6 854 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 FAM13CQ8NE31 585 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 FBXO27Q8NI29 283 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 RP9Q8TA86 221 aaKnown RBP12.67□□□□□ -0.38
SNX1-211ENST00000560829 ESAMQ96AP7 390 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 CATSPER2Q96P56 530 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 LENG8Q96PV6 779 aaPredicted RBP12.67□□□□□ -0.38
SNX1-211ENST00000560829 TMEM79Q9BSE2 394 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 TUBB1Q9H4B7 451 aa12.67□□□□□ -0.38
SNX1-211ENST00000560829 TSR3Q9UJK0 312 aaKnown RBP12.67□□□□□ -0.38
SNX1-211ENST00000560829 PIP5K1BO14986 540 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 LZTS3O60299 673 aaPredicted RBP12.66□□□□□ -0.38
SNX1-211ENST00000560829 ATG13O75143 517 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 ADH1BP00325 375 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 PRDX3P30048 256 aaKnown RBP12.66□□□□□ -0.38
SNX1-211ENST00000560829 GGT5P36269 586 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 CTSCP53634 463 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 IRX1P78414 480 aaPredicted RBP12.66□□□□□ -0.38
SNX1-211ENST00000560829 BCL7AQ4VC05 210 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 GOLGA7Q7Z5G4 137 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 ARHGAP24Q8N264 748 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 CXorf40AQ8TE69 158 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 ELMO1Q92556 727 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 GLMNQ92990 594 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 C3orf30Q96M34 536 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 KCNA7Q96RP8 456 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 CCT7Q99832 543 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 GABRG3Q99928 467 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 CD244Q9BZW8 370 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 ZCCHC2Q9C0B9 1178 aaKnown RBP12.66□□□□□ -0.38
SNX1-211ENST00000560829 PDE10AQ9Y233 779 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 COQ6Q9Y2Z9 468 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 PLXNB3Q9ULL4 1909 aa12.66□□□□□ -0.38
SNX1-211ENST00000560829 OR7A17O14581 309 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 GIPC1O14908 333 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 UBDO15205 165 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 TSPAN6O43657 245 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 RNASEH1O60930 286 aaKnown RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 VPS4BO75351 444 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 WFS1O76024 890 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 ANXA5P08758 320 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 C5AR1P21730 350 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 CTHP32929 405 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 RPIAP49247 311 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 GTF2H2Q13888 395 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 BOP1Q14137 746 aaKnown RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 ADGRE1Q14246 886 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 SQLEQ14534 574 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 RBBP7Q16576 425 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 LRIT3Q3SXY7 679 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 ZNF658BQ4V348 819 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 C2orf27AQ580R0 203 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 XKR7Q5GH72 579 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 ZNF648Q5T619 568 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 AGBL4Q5VU57 503 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 GTF2H2CQ6P1K8 395 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 UBE2R2Q712K3 238 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 PACS2Q86VP3 889 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 VRK3Q8IV63 474 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 HOMEZQ8IX15 550 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 TCAIMQ8N3R3 496 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 AADATQ8N5Z0 425 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 OR52B6Q8NGF0 335 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 MCUR1Q96AQ8 359 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 FAM131CQ96AQ9 280 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 EGFL8Q99944 293 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 CCM2Q9BSQ5 444 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 RTKNQ9BST9 563 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 TTYH1Q9H313 450 aaPredicted RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 NOL11Q9H8H0 719 aaKnown RBP12.65□□□□□ -0.38
SNX1-211ENST00000560829 AKTIPQ9H8T0 292 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 PARVBQ9HBI1 364 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 PFDN4Q9NQP4 134 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 C5orf42Q9H799 3197 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 SLC5A10A0PJK1 596 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 OR2AG2A6NM03 316 aa12.65□□□□□ -0.38
SNX1-211ENST00000560829 K7EPI3 171 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms