RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 STAMBPL1Q96FJ0 436 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 TBL1YQ9BQ87 522 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 MLPHQ9BV36 600 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-225ENST00000560005 FSD1LQ9BXM9 530 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 TMBIM4Q9HC24 238 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 TP53TG5Q9Y2B4 290 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 IGHV1OR21-1A0A087WYE8 117 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 HMGB1P1B2RPK0 211 aaPredicted RBP20.23■□□□□ 0.83
PSEN1-225ENST00000560005 PPM1DO15297 605 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 SYF2O95926 243 aaKnown RBP20.23■□□□□ 0.83
PSEN1-225ENST00000560005 EPOP01588 193 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 GM2AP17900 193 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 NR1D1P20393 614 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 STX2P32856 288 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 NSUN2Q08J23 767 aaKnown RBP eCLIP20.23■□□□□ 0.83
PSEN1-225ENST00000560005 LAMB3Q13751 1172 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 ATP1A1-AS1Q5TC04 95 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 PNCKQ6P2M8 343 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 SLC30A9Q6PML9 568 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 ZNF534Q76KX8 674 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 BMPERQ8N8U9 685 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 IL22Q9GZX6 179 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 ZMYND15Q9H091 742 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 CHMP2BQ9UQN3 213 aa20.23■□□□□ 0.83
PSEN1-225ENST00000560005 FUCA1P04066 466 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 MYCLP1P12525 358 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-225ENST00000560005 MAP4P27816 1152 aaKnown RBP20.22■□□□□ 0.83
PSEN1-225ENST00000560005 GNPDA1P46926 289 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 SEPT6Q14141 434 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 RASA2Q15283 850 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 NAGSQ8N159 534 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 PTCD2Q8WV60 388 aaKnown RBP20.22■□□□□ 0.83
PSEN1-225ENST00000560005 STARD8Q92502 1023 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 PGM2Q96G03 612 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 OXNAD1Q96HP4 312 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-225ENST00000560005 TUBGCP5Q96RT8 1024 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 CYTH2Q99418 400 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 CTRCQ99895 268 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 MGME1Q9BQP7 344 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 GORASP1Q9BQQ3 440 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 EFHD1Q9BUP0 239 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 ARNT2Q9HBZ2 717 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 TRNAU1APQ9NX07 287 aaKnown RBP20.22■□□□□ 0.83
PSEN1-225ENST00000560005 KCNK4Q9NYG8 393 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 SLC24A2Q9UI40 661 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 MAD1L1Q9Y6D9 718 aa20.22■□□□□ 0.83
PSEN1-225ENST00000560005 EXOC1LA0A1B0GW35 172 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 A8MX80 341 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 CDH16O75309 829 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 AVILO75366 819 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 AGFG2O95081 481 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 CEACAM5P06731 702 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 POLBP06746 335 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 PGAM1P18669 254 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 CA4P22748 312 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 SERPINA4P29622 427 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 RGRP47804 291 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 UQCRFS1P47985 274 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 SESN2P58004 480 aaPredicted RBP20.21■□□□□ 0.83
PSEN1-225ENST00000560005 SQSTM1Q13501 440 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 FASTKD3Q14CZ7 662 aaKnown RBP20.21■□□□□ 0.83
PSEN1-225ENST00000560005 ACOX1Q15067 660 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 C16orf46Q6P387 395 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 CASC4Q6P4E1 433 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 ZNF449Q6P9G9 518 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 TIPARPQ7Z3E1 657 aaKnown RBP20.21■□□□□ 0.83
PSEN1-225ENST00000560005 TEX19Q8NA77 164 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 OR52K1Q8NGK4 314 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 OR2W6PQ8NHA6 318 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 ATP6V1G3Q96LB4 118 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 TEFMQ96QE5 360 aaKnown RBP20.21■□□□□ 0.83
PSEN1-225ENST00000560005 DPYSL5Q9BPU6 564 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 SPRY4Q9C004 299 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 ACSS3Q9H6R3 686 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 ATP13A3Q9H7F0 1226 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 ST14Q9Y5Y6 855 aa20.21■□□□□ 0.83
PSEN1-225ENST00000560005 F5H423 210 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-225ENST00000560005 K7EM74 188 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 RGS16O15492 202 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-225ENST00000560005 ADRA1AP35348 466 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 WNT3AP56704 352 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 MC1RQ01726 317 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 FRG1Q14331 258 aaKnown RBP20.2■□□□□ 0.82
PSEN1-225ENST00000560005 SPARCL1Q14515 664 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 HP1BP3Q5SSJ5 553 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-225ENST00000560005 TMEM71Q6P5X7 295 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 KDELC1Q6UW63 502 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 RANBP10Q6VN20 620 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 DPPA4Q7L190 304 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 KDELC2Q7Z4H8 507 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 HEATR4Q86WZ0 1026 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 TDRPQ86YL5 185 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 PAF1Q8N7H5 531 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 IPMKQ8NFU5 416 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 SPATA22Q8NHS9 363 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 GSDMBQ8TAX9 411 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 ARRDC2Q8TBH0 407 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 TADA1Q96BN2 335 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 NUDCD1Q96RS6 583 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 PHPT1Q9NRX4 125 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms