RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 PBLDP30039 288 aaPredicted RBP11.96□□□□□ -0.5
HERC1-205ENST00000559886 SYTL3Q4VX76 610 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 XKR5Q6UX68 686 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 RGS9BPQ6ZS82 235 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 OXR1Q8N573 874 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 HM13Q8TCT9 377 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 SNX19Q92543 992 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 ZNF75CPQ92670 426 aaPredicted RBP11.96□□□□□ -0.5
HERC1-205ENST00000559886 GLMNQ92990 594 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 OXSMQ9NWU1 459 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 ZNHIT2Q9UHR6 403 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 KLHL33A6NCF5 533 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 LAMTOR5O43504 91 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 DLX3O60479 287 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 TAC1P20366 129 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 HTR1BP28222 390 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 RABIFP47224 123 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 TPRG1LQ5T0D9 272 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 SBSNQ6UWP8 590 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 Q6ZSR6 202 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 ADAMTSL2Q86TH1 951 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 AMZ2Q86W34 360 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 C1orf210Q8IVY1 113 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 CFAP206Q8IYR0 622 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 MAML2Q8IZL2 1156 aaPredicted RBP11.95□□□□□ -0.5
HERC1-205ENST00000559886 DEFB119Q8N690 84 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 LILRA3Q8N6C8 439 aaPredicted RBP11.95□□□□□ -0.5
HERC1-205ENST00000559886 TMEM105Q8N8V8 129 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 OR56A4Q8NGH8 313 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 FAM174AQ8TBP5 190 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 WDR92Q96MX6 357 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 MANSC1Q9H8J5 431 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 COG4Q9H9E3 785 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 FGF22Q9HCT0 170 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 FAM8A1Q9UBU6 413 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 SLC23A2Q9UGH3 650 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 TSR3Q9UJK0 312 aaKnown RBP11.95□□□□□ -0.5
HERC1-205ENST00000559886 RNF112Q9ULX5 631 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 TNFRSF10CO14798 259 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 MAP3K13O43283 966 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 MTHFD2P13995 350 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 BGNP21810 368 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 BCKDHBP21953 392 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 ATP5F1P24539 256 aaPredicted RBP11.95□□□□□ -0.5
HERC1-205ENST00000559886 FNTBP49356 437 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 PLOD1Q02809 727 aaPredicted RBP11.95□□□□□ -0.5
HERC1-205ENST00000559886 PLA2G4EQ3MJ16 856 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 PYCR3Q53H96 274 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 WDR5BQ86VZ2 330 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 TRIM42Q8IWZ5 723 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 SLC22A15Q8IZD6 547 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 OR13H1Q8NG92 308 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 RAB3IL1Q8TBN0 382 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 LRRC8CQ8TDW0 803 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 MRPL40Q9NQ50 206 aaKnown RBP11.95□□□□□ -0.5
HERC1-205ENST00000559886 GPR27Q9NS67 375 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 TM7SF3Q9NS93 570 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 SUFUQ9UMX1 484 aa11.95□□□□□ -0.5
HERC1-205ENST00000559886 PRSS38A1L453 326 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 SRRM3A6NNA2 597 aaPredicted RBP11.94□□□□□ -0.5
HERC1-205ENST00000559886 SYCE1LA8MT33 242 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 KLF11O14901 512 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 TRIM13O60858 407 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 FGF3P11487 239 aaPredicted RBP11.94□□□□□ -0.5
HERC1-205ENST00000559886 NEFHP12036 1026 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 PREPP48147 710 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 THOP1P52888 689 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 NFE2L1Q14494 772 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 CHI3L2Q15782 390 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 PPP1R3AQ16821 1122 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 ENPP7Q6UWV6 458 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 GPSM1Q86YR5 675 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 GALNT13Q8IUC8 556 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 RASGRP3Q8IV61 690 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 OR6Y1Q8NGX8 325 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 ASB11Q8WXH4 323 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 CCDC126Q96EE4 140 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 ZNF317Q96PQ6 595 aaPredicted RBP11.94□□□□□ -0.5
HERC1-205ENST00000559886 TIMM29Q9BSF4 260 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 EIF2B4Q9UI10 523 aaKnown RBP11.94□□□□□ -0.5
HERC1-205ENST00000559886 ADAMTS6Q9UKP5 1117 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 SLCO1B1Q9Y6L6 691 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 SPAG17Q6Q759 2223 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 NEMP2A6NFY4 417 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 A8MT66 165 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 GFYI3L273 518 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 UBXN8O00124 270 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 MATN4O95460 622 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 TPBGLP0DKB5 382 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 PDHA2P29803 388 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 NFKB2Q00653 900 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 DMPKQ09013 629 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 RPA4Q13156 261 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 LIPMQ5VYY2 423 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 FAM83HQ6ZRV2 1179 aaPredicted RBP11.94□□□□□ -0.5
HERC1-205ENST00000559886 SLC22A18ASQ8N1D0 253 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 DTWD2Q8NBA8 298 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 OR1E3Q8WZA6 343 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 DLG3Q92796 817 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 HSPA12BQ96MM6 686 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms