RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 BOP1Q14137 746 aaKnown RBP18.29■□□□□ 0.52
CASC4-209ENST00000559222 CRYMQ14894 314 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 C3orf38Q5JPI3 329 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 DUPD1Q68J44 220 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 CAPRIN2Q6IMN6 1127 aaKnown RBP18.29■□□□□ 0.52
CASC4-209ENST00000559222 VRK3Q8IV63 474 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 ELMO1Q92556 727 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 LPGAT1Q92604 370 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 EBNA1BP2Q99848 306 aaKnown RBP18.29■□□□□ 0.52
CASC4-209ENST00000559222 ERP44Q9BS26 406 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 POT1Q9NUX5 634 aa18.29■□□□□ 0.52
CASC4-209ENST00000559222 C17orf113A0A1B0GUU1 675 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 UBA6A0AVT1 1052 aaPredicted RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 LILRA5A6NI73 299 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 CPNE6O95741 557 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 SLC35G4P0C7Q5 338 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 HGFP14210 728 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 TYRP1P17643 537 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 PGAM1P18669 254 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 CCR7P32248 378 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 HALP42357 657 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 TTPAP49638 278 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 INHBCP55103 352 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 EIF3BP55884 814 aaKnown RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 MPP1Q00013 466 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 SLC7A5Q01650 507 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 CKAP4Q07065 602 aaKnown RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 ZFP36L1Q07352 338 aaKnown RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 CYP4F3Q08477 520 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 CTBP1Q13363 440 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 AARS2Q5JTZ9 985 aaKnown RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 ZNF470Q6ECI4 717 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 NEPROQ6NW34 567 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 CILP2Q8IUL8 1156 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 ANKMY2Q8IV38 441 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 RCBTB1Q8NDN9 531 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 WDR48Q8TAF3 677 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 RSC1A1Q92681 617 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 FAM136AQ96C01 138 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 CFAP36Q96G28 342 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 PRR11Q96HE9 360 aaPredicted RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 CCDC74BQ96LY2 380 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 BIRC8Q96P09 236 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 STN1Q9H668 368 aaKnown RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 FBXO6Q9NRD1 293 aaPredicted RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 C20orf96Q9NUD7 363 aaPredicted RBP18.28■□□□□ 0.52
CASC4-209ENST00000559222 ACSL5Q9ULC5 683 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 SATB2Q9UPW6 733 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 KNTC1P50748 2209 aa18.28■□□□□ 0.52
CASC4-209ENST00000559222 IGHV5-10-1A0A0J9YXX1 117 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 SLC5A10A0PJK1 596 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 BHMG1C9JSJ3 638 aaPredicted RBP18.27■□□□□ 0.52
CASC4-209ENST00000559222 PRMT5O14744 637 aaPredicted RBP18.27■□□□□ 0.52
CASC4-209ENST00000559222 NIPSNAP2O75323 286 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 NDUFS3O75489 264 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 FTH1P02794 183 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 OR56A5P0C7T3 313 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 PAMP19021 973 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 OGNP20774 298 aaKnown RBP18.27■□□□□ 0.52
CASC4-209ENST00000559222 FMO4P31512 558 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 SLC1A2P43004 574 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 GFERP55789 205 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 PPP1CAP62136 330 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 C16orf72Q14CZ0 275 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 HIF1AQ16665 826 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 LONRF1Q17RB8 773 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 WHAMMP3Q1A5X7 153 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 DNAJC21Q5F1R6 531 aaKnown RBP18.27■□□□□ 0.52
CASC4-209ENST00000559222 PHF19Q5T6S3 580 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 ARMC3Q5W041 872 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.27■□□□□ 0.52
CASC4-209ENST00000559222 NOA1Q8NC60 698 aaKnown RBP18.27■□□□□ 0.52
CASC4-209ENST00000559222 PHC3Q8NDX5 983 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 GALPQ9UBC7 116 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 CDYLQ9Y232 598 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 CRYL1Q9Y2S2 319 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 TEX264Q9Y6I9 313 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 FAM169AQ9Y6X4 670 aa18.27■□□□□ 0.52
CASC4-209ENST00000559222 ESYT3A0FGR9 886 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 MAGEB16A2A368 324 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 TAF4O00268 1085 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 BRINP1O60477 761 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 S1PR4O95977 384 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 ERVK-10P10266 1014 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 CCKBRP32239 447 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 PPM1FP49593 454 aaPredicted RBP18.26■□□□□ 0.51
CASC4-209ENST00000559222 GABREP78334 506 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 HSP90AA5PQ58FG0 334 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 MRNIPQ6NTE8 343 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 ZNF549Q6P9A3 640 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 TRMT10BQ6PF06 316 aaKnown RBP18.26■□□□□ 0.51
CASC4-209ENST00000559222 FOXR1Q6PIV2 292 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 ZDHHC24Q6UX98 284 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 UNC5AQ6ZN44 842 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 MAATS1Q7Z4T9 603 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 PDZD3Q86UT5 571 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 PIM3Q86V86 326 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 KCNMB4Q86W47 210 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 OR10G6Q8NH81 332 aa18.26■□□□□ 0.51
CASC4-209ENST00000559222 NCSTNQ92542 709 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms