RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 PCDH17O14917 1159 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 ATMINO43313 823 aaPredicted RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 VEGFDO43915 354 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 ASMTLO95671 621 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 GOLGA6DP0CG33 693 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 TCF4P15884 667 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 SPAM1P38567 509 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 EPHB1P54762 984 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 OTUD4Q01804 1114 aaKnown RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 NR1I3Q14994 352 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 PTPRRQ15256 657 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 VWA5B1Q5TIE3 1220 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 AGAP9Q5VTM2 703 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 HGSNATQ68CP4 663 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 NCBP2-AS2Q69YL0 99 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 TXNRD3NBQ6F5E7 133 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 DOK6Q6PKX4 331 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 C16orf47Q6ZP98 133 aaPredicted RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 CHST15Q7LFX5 561 aaPredicted RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 PRSS42Q7Z5A4 293 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 TMC3Q7Z5M5 1100 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 MAP7D3Q8IWC1 876 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 ADAMTS18Q8TE60 1221 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 HSPH1Q92598 858 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 TADA1Q96BN2 335 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 PLEKHG4BQ96PX9 1271 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 TIMM29Q9BSF4 260 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 ZSCAN5AQ9BUG6 496 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 ADGRE3Q9BY15 652 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 PDE7BQ9NP56 450 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 NPDC1Q9NQX5 325 aaPredicted RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 POT1Q9NUX5 634 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 GOLGA6AQ9NYA3 693 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 OGFRQ9NZT2 677 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 CD84Q9UIB8 345 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 NOVA2Q9UNW9 492 aaKnown RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 CHKBQ9Y259 395 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 BTRCQ9Y297 605 aa7.5□□□□□ -1.21
PCAT29-202ENST00000558941 PCYT1BQ9Y5K3 369 aaPredicted RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 DNMT3AQ9Y6K1 912 aaPredicted RBP7.5□□□□□ -1.21
PCAT29-202ENST00000558941 INTS1Q8N201 2190 aaKnown RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 TRBV23OR9-2A0A075B6M9 112 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 C1orf232A0A0U1RR37 186 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 A8MU76 341 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 FADS2P1A8MWK0 482 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 C21orf140B9A014 251 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 KMOO15229 486 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 KIAA0754O94854 1291 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 TMEM63AO94886 807 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 ATP1A1P05023 1023 aaKnown RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 MMP2P08253 660 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 SLC19A1P41440 591 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 IFI35P80217 286 aaPredicted RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 DSC2Q02487 901 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 ITKQ08881 620 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 NIPAL4Q0D2K0 466 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 DPYSL3Q14195 570 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 PCOLCEQ15113 449 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 QPCTQ16769 361 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 FAM69BQ5VUD6 431 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 E4F1Q66K89 784 aaPredicted RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 MARK2Q7KZI7 788 aaKnown RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 PHYKPLQ8IUZ5 450 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 CARFQ8N187 725 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 TRAM1L1Q8N609 369 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 BRSK1Q8TDC3 778 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 ZFPM2Q8WW38 1151 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 EID2BQ96D98 161 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 VPS35Q96QK1 796 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 GPR87Q9BY21 358 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 BRD8Q9H0E9 1235 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 SUDS3Q9H7L9 328 aaPredicted RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 ZFYVE1Q9HBF4 777 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 SLC40A1Q9NP59 571 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 ZNF624Q9P2J8 865 aaPredicted RBP7.49□□□□□ -1.21
PCAT29-202ENST00000558941 ATXN10Q9UBB4 475 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 MYO1AQ9UBC5 1043 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 SH3BGRL2Q9UJC5 107 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 PADI1Q9ULC6 663 aa7.49□□□□□ -1.21
PCAT29-202ENST00000558941 KLHL33A6NCF5 533 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 MFSD11O43934 449 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 SPAG6O75602 509 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 UBXN7O94888 489 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 SLC25A14O95258 325 aaPredicted RBP7.48□□□□□ -1.21
PCAT29-202ENST00000558941 TIAF1O95411 115 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 VIPP01282 170 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 SERPING1P05155 500 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 HLA-DQB2P05538 268 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 CCNYL3P0C7X3 344 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 ACP5P13686 325 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 ZNF7P17097 686 aaPredicted RBP7.48□□□□□ -1.21
PCAT29-202ENST00000558941 ZNF8P17098 575 aaPredicted RBP7.48□□□□□ -1.21
PCAT29-202ENST00000558941 NELFEP18615 380 aaKnown RBP7.48□□□□□ -1.21
PCAT29-202ENST00000558941 LPOP22079 712 aaPredicted RBP7.48□□□□□ -1.21
PCAT29-202ENST00000558941 PTPN4P29074 926 aa7.48□□□□□ -1.21
PCAT29-202ENST00000558941 PPIDQ08752 370 aaKnown RBP7.48□□□□□ -1.21
PCAT29-202ENST00000558941 DMPKQ09013 629 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms