RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ETF1P62495 437 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 CDK16Q00536 496 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 GRB7Q14451 532 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 ITIH4Q14624 930 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 ANKRD20A4Q4UJ75 823 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 TMEM71Q6P5X7 295 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 ZNF549Q6P9A3 640 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 C4orf22Q6V702 233 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 SYT10Q6XYQ8 523 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 RAB11FIP2Q7L804 512 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 CLEC14AQ86T13 490 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 SLC9B2Q86UD5 537 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 PHC3Q8NDX5 983 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 OR4D9Q8NGE8 314 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 WDR36Q8NI36 951 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 SNIP1Q8TAD8 396 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 FGF11Q92914 225 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 PEX13Q92968 403 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 RNF31Q96EP0 1072 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 SLC38A3Q99624 504 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 SLC30A3Q99726 388 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 MENTQ9BUN1 341 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 IL22Q9GZX6 179 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 EPB41L5Q9HCM4 733 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 APMAPQ9HDC9 416 aa12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 MN1Q10571 1320 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-207ENST00000558936 OR5K4A6NMS3 321 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 PLD2O14939 933 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 CD3EAPO15446 510 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 KCNJ13O60928 360 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 GPC4O75487 556 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 TNFSF15O95150 251 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 VAPBO95292 243 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 ITGB6P18564 788 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 WT1P19544 449 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 GABRB3P28472 473 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 GTF2H3Q13889 308 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 TGIF1Q15583 401 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 CLPPQ16740 277 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 TYSND1Q2T9J0 566 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 WDR74Q6RFH5 385 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 C19orf48Q6RUI8 117 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 AFTPHQ6ULP2 937 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 PIM3Q86V86 326 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 JAMLQ86YT9 394 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 DENND6AQ8IWF6 608 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 LSMEM2Q8N112 164 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 OR6P1Q8NGX9 317 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 FLVCR1-AS1Q8TAF5 88 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 HM13Q8TCT9 377 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 LPGAT1Q92604 370 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 LRRC45Q96CN5 670 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 ZNF578Q96N58 590 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 TTC25Q96NG3 672 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 TMEM74Q96NL1 305 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 CCM2Q9BSQ5 444 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 POT1Q9NUX5 634 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 SIDT1Q9NXL6 827 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 SLC17A6Q9P2U8 582 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 LOXL2Q9Y4K0 774 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 FER1L5A0AVI2 2057 aa12.34□□□□□ -0.43
RABGGTA-207ENST00000558936 A8MU76 341 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 TMX2-CTNND1H3BSU7 103 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 BTN3A3O00478 584 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 S1PR4O95977 384 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 VIPP01282 170 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 MLNP12872 115 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 NSG1P42857 185 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 PGGT1BP53609 377 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 EPHA4P54764 986 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 ERVPABLB-1P60509 514 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 SH3BP2P78314 561 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 GPLD1P80108 840 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 DHX9Q08211 1270 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 BIRC2Q13490 618 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 GBX1Q14549 363 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 FASTKD3Q14CZ7 662 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 BRD3Q15059 726 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 KIAA0930Q6ICG6 404 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 HIBCHQ6NVY1 386 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 FOXR1Q6PIV2 292 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 FBXO39Q8N4B4 442 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 GIMAP7Q8NHV1 300 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 NCSTNQ92542 709 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 C12orf66Q96MD2 445 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 ZCCHC2Q9C0B9 1178 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 BFARQ9NZS9 450 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 SLC24A2Q9UI40 661 aa12.33□□□□□ -0.44
RABGGTA-207ENST00000558936 SPENQ96T58 3664 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 IGHV5-51A0A0C4DH38 117 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 FAM237BA0A1B0GVD1 139 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 ZW10O43264 779 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 HCRTR1O43613 425 aa12.32□□□□□ -0.44
RABGGTA-207ENST00000558936 UBXN7O94888 489 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms