RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CACUL1Q86Y37 369 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 TRAM1L1Q8N609 369 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 DDHD1Q8NEL9 900 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 MARK4Q96L34 752 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 CATSPER2Q96P56 530 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 MID1IP1Q9NPA3 183 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 EIF2B4Q9UI10 523 aaKnown RBP12.73□□□□□ -0.37
SMAD3-207ENST00000558763 TMCO1Q9UM00 188 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 PTGDR2Q9Y5Y4 395 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 COPG1Q9Y678 874 aaKnown RBP12.73□□□□□ -0.37
SMAD3-207ENST00000558763 RGSL1A5PLK6 1076 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PLK4O00444 970 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 STK25O00506 426 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 TAPBPO15533 448 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 DGKAP23743 735 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PIK3R1P27986 724 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 NTSR1P30989 418 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PCBP2Q15366 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 LARP4Q71RC2 724 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 TMPRSS6Q8IU80 811 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PHYKPLQ8IUZ5 450 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 CLYBLQ8N0X4 340 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 OR8D1Q8WZ84 308 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 SHDQ96IW2 340 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 LENG8Q96PV6 779 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 ZSCAN5AQ9BUG6 496 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 SEMA4BQ9NPR2 832 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 OARD1Q9Y530 152 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 ZFC3H1O60293 1989 aaKnown RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 KANSL1LA0AUZ9 987 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 H0Y858 1186 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PSMD11O00231 422 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 AZIN1O14977 448 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 SLC22A2O15244 555 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 FFAR2O15552 330 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 ELFN1P0C7U0 828 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 COX4I1P13073 169 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 ATP1B2P14415 290 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 HOXB2P14652 356 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 RGS4P49798 205 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 STARD6P59095 220 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 CREB5Q02930 508 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 ENPP2Q13822 863 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 CRY1Q16526 586 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 FBXO43Q4G163 708 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 SDE2Q6IQ49 451 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 SYVN1Q86TM6 617 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 RASGRP3Q8IV61 690 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 KIRREL3Q8IZU9 778 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 MYO1HQ8N1T3 1032 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 CEP70Q8NHQ1 597 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 C19orf60Q96EN9 201 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 DTD2Q96FN9 168 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 VPS35Q96QK1 796 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PANX3Q96QZ0 392 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 UHRF1Q96T88 793 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 TMEM79Q9BSE2 394 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 MMADHCQ9H3L0 296 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 DENND2DQ9H6A0 471 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 TBC1D17Q9HA65 648 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 LTB4R2Q9NPC1 389 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PRSS16Q9NQE7 514 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 KCTD5Q9NXV2 234 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 CD274Q9NZQ7 290 aa12.72□□□□□ -0.37
SMAD3-207ENST00000558763 PTBP2Q9UKA9 531 aaKnown RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 MRPS17Q9Y2R5 130 aaKnown RBP12.72□□□□□ -0.37
SMAD3-207ENST00000558763 DOCK9Q9BZ29 2069 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 EIF3FO00303 357 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 NPC1O15118 1278 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 SYNCRIPO60506 623 aaKnown RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 MAGEC1O60732 1142 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 ADAM23O75077 832 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 CBSLP0DN79 551 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 CHRNB1P11230 501 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 ADRB3P13945 408 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 ADSLP30566 484 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 CBSP35520 551 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 COPAP53621 1224 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 NAA20P61599 178 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 MRPS21P82921 87 aaKnown RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 ZNF648Q5T619 568 aaPredicted RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 KIAA1211LQ6NV74 962 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 ERAP2Q6P179 960 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 DET1Q7L5Y6 550 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 CYP2U1Q7Z449 544 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 VRK3Q8IV63 474 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 TWIST2Q8WVJ9 160 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 BTN2A2Q8WVV5 523 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 WRAP53Q9BUR4 548 aaKnown RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 LMAN1LQ9HAT1 526 aa12.71□□□□□ -0.37
SMAD3-207ENST00000558763 CNOT6Q9ULM6 557 aaKnown RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 G3BP2Q9UN86 482 aaKnown RBP12.71□□□□□ -0.37
SMAD3-207ENST00000558763 FAM170BA6NMN3 283 aa12.7□□□□□ -0.38
SMAD3-207ENST00000558763 NUAK1O60285 661 aa12.7□□□□□ -0.38
SMAD3-207ENST00000558763 ESRRBO95718 433 aa12.7□□□□□ -0.38
SMAD3-207ENST00000558763 ALDOCP09972 364 aaKnown RBP12.7□□□□□ -0.38
SMAD3-207ENST00000558763 OR56A5P0C7T3 313 aa12.7□□□□□ -0.38
SMAD3-207ENST00000558763 XPAP23025 273 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-207ENST00000558763 NFKBIAP25963 317 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms