RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 WASH2PQ6VEQ5 465 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 LPCAT1Q8NF37 534 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 ZNF653Q96CK0 615 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 ZNF599Q96NL3 588 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 SPATA16Q9BXB7 569 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 FANCEQ9HB96 536 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 NT5MQ9NPB1 228 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 IMP3Q9NV31 184 aaKnown RBP11.51□□□□□ -0.57
SMAD3-206ENST00000558739 PLA2G3Q9NZ20 509 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 TNFRSF10DQ9UBN6 386 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 SEC14L3Q9UDX4 400 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 TMPRSS11EQ9UL52 423 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 TCRBV5S1A1TA0A578 114 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 CCDC66A2RUB6 948 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 GTPBP10A4D1E9 387 aaKnown RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 SOCS6O14544 535 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 KMOO15229 486 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 FANCGO15287 622 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 MAFKO60675 156 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 SLC4A1P02730 911 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 ST6GAL1P15907 406 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 POLR2CP19387 275 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 AGAP20933 346 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 MMP13P45452 471 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 PREPP48147 710 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 EPHB1P54762 984 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 DSC2Q02487 901 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 DPYSQ14117 519 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 CEBPEQ15744 281 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 DEFB110Q30KQ9 67 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 FAM182AQ5T1J6 154 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 RPUSD3Q6P087 351 aaKnown RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 KLHL35Q6PF15 583 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 CYP4V2Q6ZWL3 525 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 CXXC5Q7LFL8 322 aaKnown RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 TMEM200AQ86VY9 491 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 OOSP2Q86WS3 158 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 GPR26Q8NDV2 337 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 PCDHB18PQ96TA0 734 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 FOXC2Q99958 501 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 DPH2Q9BQC3 489 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 SNRNP25Q9BV90 132 aaKnown RBP11.5□□□□□ -0.57
SMAD3-206ENST00000558739 SELENOOQ9BVL4 669 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 SLC7A5P2Q9GIP4 190 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 VPS16Q9H269 839 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 LIME1Q9H400 295 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 EPS8L2Q9H6S3 715 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 TRIM39Q9HCM9 518 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 POMT2Q9UKY4 750 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
SMAD3-206ENST00000558739 CPAMD8Q8IZJ3 1885 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 BICDL2A1A5D9 508 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 F8VZ95 297 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 BIN1O00499 593 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 DAPK3O43293 454 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 IGHEP01854 428 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 AGXTP21549 392 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 CDH3P22223 829 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 HTR7P34969 479 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 MRPL14Q6P1L8 145 aaKnown RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 CDHR3Q6ZTQ4 885 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 TRAPPC5Q8IUR0 188 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 FAM20CQ8IXL6 584 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 AMER2Q8N7J2 671 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 C3orf20Q8ND61 904 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 CHDHQ8NE62 594 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 GLYATL1Q969I3 302 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 PTERQ96BW5 349 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 NAA15Q9BXJ9 866 aaKnown RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 TDRD1Q9BXT4 1180 aaKnown RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 SLC22A11Q9NSA0 550 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 CWC15Q9P013 229 aaKnown RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 IFT80Q9P2H3 777 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 DHCR7Q9UBM7 475 aaKnown RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 GPN3Q9UHW5 284 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-206ENST00000558739 HS3ST3B1Q9Y662 390 aa11.49□□□□□ -0.57
SMAD3-206ENST00000558739 E7EQ34 232 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 H3BMH7 237 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 GPR39O43194 453 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 PIRTP0C851 137 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 ESRRAP11474 423 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-206ENST00000558739 MTHFD1P11586 935 aaKnown RBP11.48□□□□□ -0.57
SMAD3-206ENST00000558739 HALP42357 657 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 SMSP52788 366 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 AIF1P55008 147 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 TMPRSS15P98073 1019 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 MFAP5Q13361 173 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 NFE2L1Q14494 772 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 KIRREL2Q6UWL6 708 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 ISLR2Q6UXK2 745 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 C3P1Q6ZMU1 363 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 SHISA6Q6ZSJ9 500 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 SPATA3Q8NHX4 192 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 NAT14Q8WUY8 206 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 THOC3Q96J01 351 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms