RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 FAM159BA6NKW6 160 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 OR52A4PA6NMU1 304 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 E5RI56 91 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 H3BMM5 538 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 TNFSF14O43557 240 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 KCNK5O95279 499 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 C1QAP02745 245 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 SLC2A4P14672 509 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 CKMT2P17540 419 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 CCR7P32248 378 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 PHBP35232 272 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 RPIAP49247 311 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 CLCA4Q14CN2 919 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.331e-5■■■□□ 16.7
TPM1-214ENST00000558544 KBTBD12Q3ZCT8 623 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 AGAP9Q5VTM2 703 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 IYDQ6PHW0 289 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 ABRAXAS1Q6UWZ7 409 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 WASH2PQ6VEQ5 465 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 STRA8Q7Z7C7 330 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 SLC26A11Q86WA9 606 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 C17orf82Q86X59 251 aaPredicted RBP17.09■□□□□ 0.33
TPM1-214ENST00000558544 SFRP1Q8N474 314 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 ARL14Q8N4G2 192 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 EIF1ADQ8N9N8 165 aaKnown RBP17.09■□□□□ 0.33
TPM1-214ENST00000558544 ATXN7L3BQ96GX2 97 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 NDNQ99608 321 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 WASH6PQ9NQA3 447 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 EVA1BQ9NVM1 165 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 NSMCE4AQ9NXX6 385 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 NCKIPSDQ9NZQ3 722 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 ACSL5Q9ULC5 683 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 PADI4Q9UM07 663 aa17.09■□□□□ 0.33
TPM1-214ENST00000558544 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 SLC5A10A0PJK1 596 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 CPED1A4D0V7 1026 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 LIN7AO14910 233 aaPredicted RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 CTIFO43310 598 aaKnown RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 UQCRHP07919 91 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 SLC35G4P0C7Q5 338 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 CEACAM1P13688 526 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 CHRM3P20309 590 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 PDHA2P29803 388 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 HALP42357 657 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 ACADVLP49748 655 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 DUSP3P51452 185 aaPredicted RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 RBM20Q5T481 1227 aaKnown RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 CYS1Q717R9 158 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 EFL1Q7Z2Z2 1120 aaKnown RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 CTAGE3PQ8IX95 158 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 TMEM159Q96B96 161 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 AARSD1Q9BTE6 412 aaKnown RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 OR52A5Q9H2C5 316 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 GALPQ9UBC7 116 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 CFAP20Q9Y6A4 193 aaKnown RBP17.08■□□□□ 0.32
TPM1-214ENST00000558544 RNF215Q9Y6U7 377 aa17.08■□□□□ 0.32
TPM1-214ENST00000558544 KIR2DS5A0A0G2JLQ3 304 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 A0A0G2JNG1 304 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 EME2A4GXA9 379 aaPredicted RBP17.07■□□□□ 0.32
TPM1-214ENST00000558544 OR5K4A6NMS3 321 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 KIR2DS3K7RE56 304 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 ACP1P24666 158 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 AOAHP28039 575 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 SIM1P81133 766 aaPredicted RBP17.07■□□□□ 0.32
TPM1-214ENST00000558544 HSPA14Q0VDF9 509 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 RPA4Q13156 261 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 BIRC2Q13490 618 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 KIR2DS5Q14953 304 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 TMED2Q15363 201 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 CCDC157Q569K6 752 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 PERM1Q5SV97 790 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 DUS1LQ6P1R4 473 aaKnown RBP17.07■□□□□ 0.32
TPM1-214ENST00000558544 CCNI2Q6ZMN8 369 aaPredicted RBP17.07■□□□□ 0.32
TPM1-214ENST00000558544 OTOAQ7RTW8 1153 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 GLRX5Q86SX6 157 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 PPM1NQ8N819 430 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 GPATCH11Q8N954 259 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 IFI44Q8TCB0 444 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 CCDC74AQ96AQ1 378 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 C12orf66Q96MD2 445 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
TPM1-214ENST00000558544 TOR4AQ9NXH8 423 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 ZNF624Q9P2J8 865 aaPredicted RBP17.07■□□□□ 0.32
TPM1-214ENST00000558544 MED16Q9Y2X0 877 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 COMMD10Q9Y6G5 202 aa17.07■□□□□ 0.32
TPM1-214ENST00000558544 APOA4P06727 396 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 GLB1P16278 677 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 SLC19A1P41440 591 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 PMS2P54278 862 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 UBE2IP63279 158 aaKnown RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 HHEXQ03014 270 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 PUM1Q14671 1186 aaKnown RBP eCLIP17.06■□□□□ 0.325e-9■□□□□ 8.1
TPM1-214ENST00000558544 NAA30Q147X3 362 aaPredicted RBP17.06■□□□□ 0.32
TPM1-214ENST00000558544 RPE65Q16518 533 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 SLC9B2Q86UD5 537 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 VRK3Q8IV63 474 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 SPNS2Q8IVW8 549 aa17.06■□□□□ 0.32
TPM1-214ENST00000558544 TRIM48Q8IWZ4 208 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms