RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 FOXB2Q5VYV0 432 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 PHACTR4Q8IZ21 702 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 ZNF540Q8NDQ6 660 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 PSKH2Q96QS6 385 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 FNIP2Q9P278 1114 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 TFAP2AP05549 437 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 UMPSP11172 480 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 ALDH9A1P49189 494 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 HTR6P50406 440 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 BNIP3Q12983 259 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 RETREG3Q86VR2 466 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 CNTN4Q8IWV2 1026 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 CMTR2Q8IYT2 770 aaKnown RBP15.23■□□□□ 0.03
AP4E1-202ENST00000558439 TERB1Q8NA31 727 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 CD99L2Q8TCZ2 262 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 EMILIN2Q9BXX0 1053 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 RAD21L1Q9H4I0 556 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 SMURF2Q9HAU4 748 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 TNFRSF12AQ9NP84 129 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 CCM2LQ9NUG4 571 aaPredicted RBP15.23■□□□□ 0.03
AP4E1-202ENST00000558439 NLE1Q9NVX2 485 aaPredicted RBP15.23■□□□□ 0.03
AP4E1-202ENST00000558439 CMTM6Q9NX76 183 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 IFT80Q9P2H3 777 aaPredicted RBP15.23■□□□□ 0.03
AP4E1-202ENST00000558439 TTC3P53804 2025 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 A0A1W2PPW3 197 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 C7orf72A4D263 438 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 hCG_2039718K7EN88 272 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 LZTS3O60299 673 aaPredicted RBP15.23■□□□□ 0.03
AP4E1-202ENST00000558439 GNAO1P09471 354 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 MAGEA12P43365 314 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 APLP1P51693 650 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 OR4D2P58180 307 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 PAGE3Q5JUK9 113 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 LARP4Q71RC2 724 aaKnown RBP eCLIP15.23■□□□□ 0.03
AP4E1-202ENST00000558439 GOLGA7Q7Z5G4 137 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 OTULINQ96BN8 352 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 REXO5Q96IC2 774 aaKnown RBP15.23■□□□□ 0.03
AP4E1-202ENST00000558439 MAGED4Q96JG8 741 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 RANBP9Q96S59 729 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 TIMMDC1Q9NPL8 285 aa15.23■□□□□ 0.03
AP4E1-202ENST00000558439 ILVBLA1L0T0 632 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 TOR1BO14657 336 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 MUSKO15146 869 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CLDN9O95484 217 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 SLC6A2P23975 617 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 RGRP47804 291 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 RPL34P49207 117 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 NAA20P61599 178 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 ACOX1Q15067 660 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CHRNA6Q15825 494 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 RNF111Q6ZNA4 994 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 OR7A2PQ8NGA2 310 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 NSMCE3Q96MG7 304 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 ZNF599Q96NL3 588 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 LOC730098B7Z3J9 87 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 K7ERQ8 282 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 UBFD1O14562 309 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CA12O43570 354 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 SBK3P0C264 359 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 OXTRP30559 389 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CYP4F3Q08477 520 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 MRPL10Q7Z7H8 261 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 ARRDC2Q8TBH0 407 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 LZICQ8WZA0 190 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CACYBPQ9HB71 228 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 TPRKBQ9Y3C4 175 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CXCR6O00574 342 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 COCHO43405 550 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 DIRAS1O95057 198 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 TMED10P49755 219 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 IST1P53990 364 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CYP4F8P98187 520 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 CCNYL2Q5T2Q4 361 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 ACBD5Q5T8D3 534 aaPredicted RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 OGFOD2Q6N063 350 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 FIBCD1Q8N539 461 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 C12orf43Q96C57 262 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 PRICKLE1Q96MT3 831 aaPredicted RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 GPR78Q96P69 363 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 MTERF1Q99551 399 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 SLAMF8Q9P0V8 285 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 PAIP2BQ9ULR5 123 aaKnown RBP15.22■□□□□ 0.03
AP4E1-202ENST00000558439 RNF11Q9Y3C5 154 aa15.22■□□□□ 0.03
AP4E1-202ENST00000558439 LOC100506127A0A0U1RQW1 187 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 ARVCFO00192 962 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 SERPINA1P01009 418 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 COL6A1P12109 1028 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 IL7RP16871 459 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 S100A5P33763 92 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 EEFSECP57772 596 aaKnown RBP15.21■□□□□ 0.03
AP4E1-202ENST00000558439 CLLU1OSQ5K130 101 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 BLOC1S3Q6QNY0 202 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 FUBP1Q96AE4 644 aaKnown RBP15.21■□□□□ 0.03
AP4E1-202ENST00000558439 ZNF558Q96NG5 402 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 C6orf62Q9GZU0 229 aaPredicted RBP15.21■□□□□ 0.03
AP4E1-202ENST00000558439 PRSS51A0A1B0GVH4 220 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 RGS5O15539 181 aa15.21■□□□□ 0.03
AP4E1-202ENST00000558439 DFNA5O60443 496 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms