RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ZGRF1Q86YA3 2104 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 ZFPM2Q8WW38 1151 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 HDAC11Q96DB2 347 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 C12orf66Q96MD2 445 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 BARD1Q99728 777 aaKnown RBP17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 ZNF552Q9H707 407 aaPredicted RBP17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 CBX8Q9HC52 389 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 C1GALT1Q9NS00 363 aa17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 DNMT3AQ9Y6K1 912 aaPredicted RBP17.34■□□□□ 0.37
TSPAN3-204ENST00000558394 LRRC53A6NM62 1247 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 E7EQ34 232 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 KCNK1O00180 336 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 MATN2O00339 956 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 ZG16O60844 167 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 POLR2CP19387 275 aaPredicted RBP17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 HLA-DPA1P20036 260 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 CA5AP35218 305 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 FOLR3P41439 243 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 KLHL30Q0D2K2 578 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 DPYSL3Q14195 570 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 GSE1Q14687 1217 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 CRB2Q5IJ48 1285 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 LDLRAP1Q5SW96 308 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 TMEM220Q6QAJ8 160 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 Q6ZS92 163 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 CUZD1Q86UP6 607 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 NT5DC3Q86UY8 548 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 KCNMB4Q86W47 210 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 MAP7D3Q8IWC1 876 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 NIPA2Q8N8Q9 360 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 OR1L3Q8NH93 324 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 N4BP2L2Q92802 583 aaPredicted RBP17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 INPP5DQ92835 1189 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 BTBD6Q96KE9 485 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 SLC24A2Q9UI40 661 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 ANAPC7Q9UJX3 599 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 NTNG1Q9Y2I2 539 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 COLEC10Q9Y6Z7 277 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 SVILO95425 2214 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 OTOGQ6ZRI0 2925 aa17.33■□□□□ 0.36
TSPAN3-204ENST00000558394 CCDC88CQ9P219 2028 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 A0A1B0GUH1 482 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 GSAPA4D1B5 854 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 OR2AG2A6NM03 316 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.361e-9■■■■■ 47.1
TSPAN3-204ENST00000558394 CD63P08962 238 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 SLC35G4P0C7Q5 338 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 ITGA3P26006 1051 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 NDUFS1P28331 727 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 GBE1Q04446 702 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 PPP2R5EQ16537 467 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 ZFYVE27Q5T4F4 411 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 ZDHHC20Q5W0Z9 365 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 DUS1LQ6P1R4 473 aaKnown RBP17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 FAM83HQ6ZRV2 1179 aaPredicted RBP17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 B4GALNT4Q76KP1 1039 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 GPR135Q8IZ08 494 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 RASGEF1AQ8N9B8 481 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 FAM71BQ8TC56 605 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 PPM1MQ96MI6 270 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 TRIB3Q96RU7 358 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 INSM2Q96T92 566 aaPredicted RBP17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 ZNF670Q9BS34 389 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 WWP1Q9H0M0 922 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 KIR3DX1Q9H7L2 352 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 ATP13A2Q9NQ11 1180 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 COPG2Q9UBF2 871 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 NDOR1Q9UHB4 597 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 TMPRSS11EQ9UL52 423 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 PTRH2Q9Y3E5 179 aaKnown RBP17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 FER1L5A0AVI2 2057 aa17.32■□□□□ 0.36
TSPAN3-204ENST00000558394 APCP25054 2843 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 MYO1FO00160 1098 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 ZNF749O43361 778 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 ATXN8OSP0DMR3 200 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 EDN3P14138 238 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 CTSCP53634 463 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 MYL5Q02045 173 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 PDK2Q15119 407 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 CYP2A13Q16696 494 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 METRNLQ641Q3 311 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 OR4E2Q8NGC2 313 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 COG1Q8WTW3 980 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 WDR77Q9BQA1 342 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 ISCUQ9H1K1 167 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 P4HTMQ9NXG6 502 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 POMT2Q9UKY4 750 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 ACSL5Q9ULC5 683 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 PCSK5Q92824 1860 aa17.31■□□□□ 0.36
TSPAN3-204ENST00000558394 LRRC10BA6NIK2 292 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 NDST3O95803 873 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 AP1B1Q10567 949 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 IRAK1BP1Q5VVH5 260 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 SPOCD1Q6ZMY3 1216 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 GDF7Q7Z4P5 450 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 FJX1Q86VR8 437 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms