RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 FUT10Q6P4F1 479 aa5.94□□□□□ -1.46
RTF1-204ENST00000558117 WDR63Q8IWG1 891 aa5.94□□□□□ -1.46
RTF1-204ENST00000558117 DHX40Q8IX18 779 aaKnown RBP5.94□□□□□ -1.46
RTF1-204ENST00000558117 TBATAQ96M53 351 aa5.94□□□□□ -1.46
RTF1-204ENST00000558117 TMEM47Q9BQJ4 181 aa5.94□□□□□ -1.46
RTF1-204ENST00000558117 WDR83Q9BRX9 315 aaKnown RBP5.94□□□□□ -1.46
RTF1-204ENST00000558117 DERAQ9Y315 318 aa5.94□□□□□ -1.46
RTF1-204ENST00000558117 RP1L1Q8IWN7 2480 aaPredicted RBP5.94□□□□□ -1.46
RTF1-204ENST00000558117 KNL1Q8NG31 2342 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 COL6A5A8TX70 2615 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 DYTNA2CJ06 578 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 CD8B2A6NJW9 211 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 PRSS47A8MTI9 375 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 ZNF197O14709 1029 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 FLRT2O43155 660 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 AGR2O95994 175 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 GSTM2P28161 218 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 HNF1BP35680 557 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 PNPLA4P41247 253 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 OR1G1P47890 313 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 NLRP11P59045 1033 aaKnown RBP5.93□□□□□ -1.46
RTF1-204ENST00000558117 ZNF33AQ06730 810 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 DSC1Q08554 894 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 FHL1Q13642 323 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 QRICH1Q2TAL8 776 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 ITPRIPL2Q3MIP1 535 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 ADCK5Q3MIX3 580 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 GXYLT1Q4G148 440 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 FBXO43Q4G163 708 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 ENTPD8Q5MY95 495 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 PLPPR4Q7Z2D5 763 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 GPSM1Q86YR5 675 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 LNX1Q8TBB1 728 aaPredicted RBP5.93□□□□□ -1.46
RTF1-204ENST00000558117 URGCPQ8TCY9 931 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 KCNE4Q8WWG9 221 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 EBF3Q9H4W6 596 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 TASP1Q9H6P5 420 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 FZD3Q9NPG1 666 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
RTF1-204ENST00000558117 JMJD1CQ15652 2540 aa5.93□□□□□ -1.46
RTF1-204ENST00000558117 ARHGEF37A1IGU5 675 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 TSPY2A6NKD2 308 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 SYN3O14994 580 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 INSIG1O15503 277 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 IRAK2O43187 625 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 C22orf31O95567 290 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 NTN1O95631 604 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 GOLGA8HP0CJ92 632 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 TOP1P11387 765 aaKnown RBP5.92□□□□□ -1.46
RTF1-204ENST00000558117 HSD3B1P14060 373 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 DARSP14868 501 aaKnown RBP5.92□□□□□ -1.46
RTF1-204ENST00000558117 TBXAS1P24557 533 aaPredicted RBP5.92□□□□□ -1.46
RTF1-204ENST00000558117 ODF3L2Q3SX64 289 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 ALG10Q5BKT4 473 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 ALG10BQ5I7T1 473 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 ANKRD45Q5TZF3 282 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 CCDC25Q86WR0 208 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 TMEM57Q8N5G2 664 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 DEFB119Q8N690 84 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 C9orf106Q8NAJ2 232 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 CEP70Q8NHQ1 597 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 SSC4DQ8WTU2 575 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 TMEM174Q8WUU8 243 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 ZNF419Q96HQ0 510 aaPredicted RBP5.92□□□□□ -1.46
RTF1-204ENST00000558117 FAM20AQ96MK3 541 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 COG8Q96MW5 612 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 ZNF578Q96N58 590 aaPredicted RBP5.92□□□□□ -1.46
RTF1-204ENST00000558117 WACQ9BTA9 647 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 CLIC5Q9NZA1 410 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 FBXO2Q9UK22 296 aaPredicted RBP5.92□□□□□ -1.46
RTF1-204ENST00000558117 DNAJC16Q9Y2G8 782 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 CSPG4Q6UVK1 2322 aa5.92□□□□□ -1.46
RTF1-204ENST00000558117 TACC2O95359 2948 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 C17orf100A8MU93 164 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 AP5Z1O43299 807 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 EPB41L2O43491 1005 aaKnown RBP5.91□□□□□ -1.46
RTF1-204ENST00000558117 CSDE1O75534 798 aaKnown RBP5.91□□□□□ -1.46
RTF1-204ENST00000558117 TOMM40O96008 361 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 SFTPCP11686 197 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 FCGR2AP12318 317 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 CYP4B1P13584 511 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 GJA1P17302 382 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 TNFAIP3P21580 790 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 CDC25AP30304 524 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 MCM2P49736 904 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 RPS6KA3P51812 740 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 MVDP53602 400 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 BNC1Q01954 994 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 MAPK7Q13164 816 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 TBX2Q13207 712 aaPredicted RBP5.91□□□□□ -1.46
RTF1-204ENST00000558117 THOC5Q13769 683 aaKnown RBP5.91□□□□□ -1.46
RTF1-204ENST00000558117 PTGR1Q14914 329 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 PSMD5Q16401 504 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 HES3Q5TGS1 186 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 HAUS6Q7Z4H7 955 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 BRSK2Q8IWQ3 736 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 AZI2Q9H6S1 392 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 GAREM1Q9H706 876 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 POLG2Q9UHN1 485 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 PCDHGA1Q9Y5H4 931 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms