RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 VPS9D1Q9Y2B5 631 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 FAM32AQ9Y421 112 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 ORC6Q9Y5N6 252 aa11.65□□□□□ -0.54
VIPAS39-211ENST00000557658 M0R3G1 203 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 AQP9O43315 295 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 KDM1AO60341 852 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 GABARAPO95166 117 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 CCDC159P0C7I6 412 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 SERPINB10P48595 397 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF140P52738 457 aaPredicted RBP11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 HK3P52790 923 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 IL2P60568 153 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 MRPS6P82932 125 aaKnown RBP11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 IL18R1Q13478 541 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 NKG7Q16617 165 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF691Q5VV52 312 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 LAIR2Q6ISS4 152 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 MON1AQ86VX9 555 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 HS3ST5Q8IZT8 346 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF548Q8NEK5 533 aaPredicted RBP11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 OR52B6Q8NGF0 335 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 OR5K1Q8NHB7 308 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 IGSF8Q969P0 613 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 FAM162AQ96A26 154 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 CDK15Q96Q40 435 aa11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 THUMPD3Q9BV44 507 aaKnown RBP11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 POLR3HQ9Y535 204 aaPredicted RBP11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 GPC6Q9Y625 555 aaPredicted RBP11.65□□□□□ -0.55
VIPAS39-211ENST00000557658 MUSKO15146 869 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 PFDN6O15212 129 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 DFNA5O60443 496 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 E2F6O75461 281 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 JRKO75564 520 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 SCELO95171 688 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 TSPAN12O95859 305 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 CAPN1P07384 714 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 PKMP14618 531 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 RYKP34925 604 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 CPT1AP50416 773 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 LAPTM5Q13571 262 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 ACOX1Q15067 660 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 DGUOKQ16854 277 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 RFX4Q33E94 735 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 RAP1GAP2Q684P5 730 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 FBXL22Q6P050 247 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 LETMD1Q6P1Q0 360 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 PLEKHH3Q7Z736 793 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 NAT16Q8N8M0 369 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 SIDT2Q8NBJ9 832 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 OR4K2Q8NGD2 314 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 OR10A6Q8NH74 314 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 ZFP90Q8TF47 636 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 LINGO1Q96FE5 620 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 KATNAL1Q9BW62 490 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 VAPAQ9P0L0 249 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 TMED5Q9Y3A6 229 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 ASB1Q9Y576 335 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 PCDHGB1Q9Y5G3 927 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 ELOVL7A1L3X0 281 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 TOR1BO14657 336 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 ANKRD28O15084 1053 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 LSM1O15116 133 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 PRAMEF11O60813 436 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 POMCP01189 267 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 CHRNA1P02708 482 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 AKT1P31749 480 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 ACVRL1P37023 503 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 HTR6P50406 440 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 YBEYP58557 167 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 CYP4F3Q08477 520 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 CD300CQ08708 224 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 AP5B1Q2VPB7 878 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 TMEM53Q6P2H8 277 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 SCAIQ8N9R8 606 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 OR52E4Q8NGH9 312 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 EEF1AKMT1Q8WVE0 214 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC13A3Q8WWT9 602 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 RORBQ92753 470 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF566Q969W8 418 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 NSMCE3Q96MG7 304 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 RPRD1AQ96P16 312 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 SH3GL1Q99961 368 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 NECTIN3Q9NQS3 549 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 PAK1IP1Q9NWT1 392 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 EVLQ9UI08 416 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 SCML2Q9UQR0 700 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 NEUROG3Q9Y4Z2 214 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 TRPV2Q9Y5S1 764 aa11.64□□□□□ -0.55
VIPAS39-211ENST00000557658 CXCR6O00574 342 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC16A6O15403 523 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 PRKD3O94806 890 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 NADKO95544 446 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 OR1E1P30953 314 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 DCTP40126 519 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 EMX1Q04741 257 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 EFEMP1Q12805 493 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 ZC3H12BQ5HYM0 836 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 AGAP7PQ5VUJ5 663 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 ANKRD34AQ69YU3 496 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms