RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PREPP48147 710 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 UBE2IP63279 158 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 SLC7A5Q01650 507 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 GSTM4Q03013 218 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 PDIA2Q13087 525 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 TARDBPQ13148 414 aaKnown RBP eCLIP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 SPANXN3Q5MJ09 141 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 CDCP2Q5VXM1 449 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 PTRHD1Q6GMV3 140 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 DUS1LQ6P1R4 473 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 ZNF449Q6P9G9 518 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 XKR5Q6UX68 686 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 KCNMB4Q86W47 210 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 LRRC6Q86X45 466 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 CILP2Q8IUL8 1156 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 IGDCC3Q8IVU1 814 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 DCBLD1Q8N8Z6 715 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 GPR150Q8NGU9 434 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 CALML6Q8TD86 181 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 SH3KBP1Q96B97 665 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 LRRC39Q96DD0 335 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 RMDN2Q96LZ7 410 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 C12orf66Q96MD2 445 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 TCF12Q99081 682 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 WDR83Q9BRX9 315 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 FAM167BQ9BTA0 163 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 LRRC1Q9BTT6 524 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 GRHL1Q9NZI5 618 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 ZC3H7BQ9UGR2 993 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 ATXN7L1Q9ULK2 861 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 MSRB2Q9Y3D2 182 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 CFAP20Q9Y6A4 193 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 TEX264Q9Y6I9 313 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 FAM169AQ9Y6X4 670 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 IGHV1OR21-1A0A087WYE8 117 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 ESYT3A0FGR9 886 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 LILRA5A6NI73 299 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 IQCF5A8MTL0 148 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 LIN7AO14910 233 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 B4GAT1O43505 415 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 DUX1O43812 170 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 CPNE6O95741 557 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 F7P08709 466 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 RPS3P23396 243 aaKnown RBP eCLIP10.35□□□□□ -0.753e-12■□□□□ 11
HNRNPC-232ENST00000557442 SLC1A2P43004 574 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 PDX1P52945 283 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 PLTPP55058 493 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 CSE1LP55060 971 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 CTBP1Q13363 440 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 GPR18Q14330 331 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 FASTKD3Q14CZ7 662 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 BRD3Q15059 726 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 RPE65Q16518 533 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 ISXQ2M1V0 245 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 ZNF658BQ4V348 819 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 HSP90AA5PQ58FG0 334 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 NKAIN2Q5VXU1 208 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 NAPRTQ6XQN6 538 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 CCNI2Q6ZMN8 369 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 UNC5AQ6ZN44 842 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 TMEM26Q6ZUK4 368 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 CENPUQ71F23 418 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 DENND6AQ8IWF6 608 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 LMNTD2Q8IXW0 634 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 ZBED8Q8IZ13 594 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 UNC5BQ8IZJ1 945 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 KRT222Q8N1A0 295 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 NOA1Q8NC60 698 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 FBXO36Q8NEA4 188 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 OR10G6Q8NH81 332 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 LKAAEAR1Q8TD35 194 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 LPGAT1Q92604 370 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 CERS2Q96G23 380 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 AHCYL2Q96HN2 611 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 PANX3Q96QZ0 392 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 TBC1D10AQ9BXI6 508 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 FOXP3Q9BZS1 431 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 P2RY12Q9H244 342 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 RDH14Q9HBH5 336 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 EPB41L5Q9HCM4 733 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 FBXO6Q9NRD1 293 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 IARS2Q9NSE4 1012 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 INTS10Q9NVR2 710 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 CRYL1Q9Y2S2 319 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 PCDHB1Q9Y5F3 818 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 APC2O95996 2303 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 HEATR5BQ9P2D3 2071 aa10.35□□□□□ -0.75
HNRNPC-232ENST00000557442 PRAMEF33A0A0G2JMD5 474 aa10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 FAM221BA6H8Z2 402 aa10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 E7ESA3 106 aa10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 IFRD1O00458 451 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 ESR1P03372 595 aa10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 APOA4P06727 396 aa10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 ERVK-10P10266 1014 aa10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 PDHA2P29803 388 aa10.34□□□□□ -0.75
HNRNPC-232ENST00000557442 FMO4P31512 558 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms