RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 GLB1P16278 677 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 SLC19A1P41440 591 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 ADARP55265 1226 aaKnown RBP20.48■□□□□ 0.87
SEC23A-213ENST00000557280 KIR2DS5Q14953 304 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.48■□□□□ 0.87
SEC23A-213ENST00000557280 ZNF438Q7Z4V0 828 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 LRRC6Q86X45 466 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 VRK3Q8IV63 474 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 PALM2Q8IXS6 379 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 Q8N9G6 341 aaPredicted RBP20.48■□□□□ 0.87
SEC23A-213ENST00000557280 INSM2Q96T92 566 aaPredicted RBP20.48■□□□□ 0.87
SEC23A-213ENST00000557280 FMO2Q99518 471 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 FAM129AQ9BZQ8 928 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 LRRC4CQ9HCJ2 640 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 CPNE7Q9UBL6 633 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 APOBEC2Q9Y235 224 aaKnown RBP20.48■□□□□ 0.87
SEC23A-213ENST00000557280 MED16Q9Y2X0 877 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 PCDHGA1Q9Y5H4 931 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 TCRBV9S1A1TA0A576 114 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 SLC5A10A0PJK1 596 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 KLHL33A6NCF5 533 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 NUDT21O43809 227 aaKnown RBP20.47■□□□□ 0.87
SEC23A-213ENST00000557280 TOP3BO95985 862 aaKnown RBP20.47■□□□□ 0.87
SEC23A-213ENST00000557280 ESR1P03372 595 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 GP1BAP07359 652 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 PKMP14618 531 aaKnown RBP20.47■□□□□ 0.87
SEC23A-213ENST00000557280 AOAHP28039 575 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 FASLGP48023 281 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 LEPRP48357 1165 aaKnown RBP20.47■□□□□ 0.87
SEC23A-213ENST00000557280 HHEXQ03014 270 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 MGAT5Q09328 741 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 CUL1Q13616 776 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 RPE65Q16518 533 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 IFT20Q8IY31 132 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 NDNQ99608 321 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 EVA1BQ9NVM1 165 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 MTRF1LQ9UGC7 380 aaKnown RBP20.47■□□□□ 0.87
SEC23A-213ENST00000557280 ACSL5Q9ULC5 683 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 CDYLQ9Y232 598 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 PCDHB1Q9Y5F3 818 aa20.47■□□□□ 0.87
SEC23A-213ENST00000557280 COL27A1Q8IZC6 1860 aaPredicted RBP20.47■□□□□ 0.87
SEC23A-213ENST00000557280 ASXL3Q9C0F0 2248 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 RHPN2P1A8MT19 583 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 CXorf49A8MYA2 514 aaPredicted RBP20.46■□□□□ 0.87
SEC23A-213ENST00000557280 PFDN6O15212 129 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 AHSGP02765 367 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 GSTM1P09488 218 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 SLC35G4P0C7Q5 338 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 SLC2A4P14672 509 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 OR1D5P58170 312 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 INSM1Q01101 510 aaPredicted RBP20.46■□□□□ 0.87
SEC23A-213ENST00000557280 GSTM4Q03013 218 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 NR1D2Q14995 579 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 SYTL3Q4VX76 610 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 RBM20Q5T481 1227 aaKnown RBP20.46■□□□□ 0.87
SEC23A-213ENST00000557280 CAPRIN2Q6IMN6 1127 aaKnown RBP20.46■□□□□ 0.87
SEC23A-213ENST00000557280 SPRED1Q7Z699 444 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 SLC9B2Q86UD5 537 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 JPH3Q8WXH2 748 aaPredicted RBP20.46■□□□□ 0.87
SEC23A-213ENST00000557280 C12orf66Q96MD2 445 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 SLC30A3Q99726 388 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 SARS2Q9NP81 518 aaKnown RBP20.46■□□□□ 0.87
SEC23A-213ENST00000557280 IMP3Q9NV31 184 aaKnown RBP20.46■□□□□ 0.87
SEC23A-213ENST00000557280 NINJ2Q9NZG7 142 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 ZFATQ9P243 1243 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 VPS9D1Q9Y2B5 631 aa20.46■□□□□ 0.87
SEC23A-213ENST00000557280 RP1P56715 2156 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 A0A1W2PQM1 296 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 OR5K4A6NMS3 321 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 LIN7AO14910 233 aaPredicted RBP20.45■□□□□ 0.86
SEC23A-213ENST00000557280 OPA1O60313 960 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 MYBL2P10244 700 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 MTHFD1P11586 935 aaKnown RBP20.45■□□□□ 0.86
SEC23A-213ENST00000557280 XRCC1P18887 633 aaPredicted RBP20.45■□□□□ 0.86
SEC23A-213ENST00000557280 HALP42357 657 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 CCL7P80098 99 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 ILKQ13418 452 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 EFTUD2Q15029 972 aaKnown RBP eCLIP20.45■□□□□ 0.866e-9■■■■■ 27.1
SEC23A-213ENST00000557280 C3orf62Q6ZUJ4 267 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 PDZD3Q86UT5 571 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 MARCH9Q86YJ5 346 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 TRIM48Q8IWZ4 208 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 CHCHD4Q8N4Q1 142 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 GIMAP7Q8NHV1 300 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 CXorf40BQ96DE9 158 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 CDC42EP4Q9H3Q1 356 aaKnown RBP20.45■□□□□ 0.86
SEC23A-213ENST00000557280 SYNDIG1Q9H7V2 258 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 ANKZF1Q9H8Y5 726 aa20.45■□□□□ 0.86
SEC23A-213ENST00000557280 FAM159BA6NKW6 160 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 B4GAT1O43505 415 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 GPC4O75487 556 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 SLU7O95391 586 aaKnown RBP20.44■□□□□ 0.86
SEC23A-213ENST00000557280 RPLP0P05388 317 aaKnown RBP20.44■□□□□ 0.86
SEC23A-213ENST00000557280 FAM153BP0C7A2 387 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 TIAL1Q01085 375 aaKnown RBP eCLIP20.44■□□□□ 0.86
SEC23A-213ENST00000557280 HSPA14Q0VDF9 509 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 FOXC1Q12948 553 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 BIRC2Q13490 618 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 KYNUQ16719 465 aa20.44■□□□□ 0.86
SEC23A-213ENST00000557280 FAM153CQ494X1 144 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms