RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 H7BY64 318 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 NTN3O00634 580 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 APOL1O14791 398 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 JCHAINP01591 159 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 MPOP05164 745 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 CEACAM5P06731 702 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 CTPS1P17812 591 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 ABCG1P45844 678 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 GPR1P46091 355 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 HADHBP55084 474 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 IFI35P80217 286 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 CDK3Q00526 305 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 SRSF2Q01130 221 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 DSC2Q02487 901 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 SPIDRQ14159 915 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 IHHQ14623 411 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 PDK1Q15118 436 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 ODF2Q5BJF6 829 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 LRRC66Q68CR7 880 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 BZW1Q7L1Q6 419 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 TSPAN33Q86UF1 283 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 HEATR4Q86WZ0 1026 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 ZZZ3Q8IYH5 903 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 PELI3Q8N2H9 469 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 PRR18Q8N4B5 295 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 PLD5Q8N7P1 536 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 ZNF248Q8NDW4 579 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 PPP1R35Q8TAP8 253 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 DLG3Q92796 817 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 AP2M1Q96CW1 435 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 CCDC138Q96M89 665 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 LYSMD1Q96S90 227 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 ADGRE3Q9BY15 652 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 GSDMCQ9BYG8 508 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 CEP41Q9BYV8 373 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 FRMD8Q9BZ67 464 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 TMEM168Q9H0V1 697 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 DPEP2Q9H4A9 486 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 PCDH9Q9HC56 1237 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 MOSPD1Q9UJG1 213 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 RALYQ9UKM9 306 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 CHKBQ9Y259 395 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 SLC17A4Q9Y2C5 497 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 HEY1Q9Y5J3 304 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 ENTPD2Q9Y5L3 495 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 CAPN6Q9Y6Q1 641 aa9.75□□□□□ -0.85
HNRNPC-228ENST00000557033 URB1O60287 2271 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 CAPN8A6NHC0 703 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 ANKRD66B4E2M5 251 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 H3BML4 177 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 ZW10O43264 779 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 NUDT21O43809 227 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 LCA5LO95447 670 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 PRLP01236 227 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 FUCA1P04066 466 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 HLA-DQB2P05538 268 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 IVLP07476 585 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 ENPP1P22413 925 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 RBMS1P29558 406 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 MAGEA1P43355 309 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 NR2C2P49116 596 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 STC1P52823 247 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 NIPAL4Q0D2K0 466 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 ILF3Q12906 894 aaKnown RBP eCLIP9.74□□□□□ -0.855e-16■■■□□ 17
HNRNPC-228ENST00000557033 EIF3IQ13347 325 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 SLC9A5Q14940 896 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 PTPRRQ15256 657 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 C14orf28Q4W4Y0 310 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 TOR2AQ5JU69 321 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 CERCAMQ5T4B2 595 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 KCTD16Q68DU8 428 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 RAET1GQ6H3X3 334 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 CCDC170Q8IYT3 715 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 NKAPQ8N5F7 415 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 TEX19Q8NA77 164 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 KYQ8NBH2 561 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 EXD1Q8NHP7 514 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 GIMAP7Q8NHV1 300 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 WDR36Q8NI36 951 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 KIAA1524Q8TCG1 905 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 MVB12AQ96EY5 273 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 SCARF2Q96GP6 870 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 ATXN7L3BQ96GX2 97 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 FAM46AQ96IP4 442 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 HIC2Q96JB3 615 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 SLC46A1Q96NT5 459 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 GFM1Q96RP9 751 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 LGMNQ99538 433 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 MLPHQ9BV36 600 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 TRIM5Q9C035 493 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 ABCG8Q9H221 673 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 AKTIPQ9H8T0 292 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 CARS2Q9HA77 564 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 THSD1Q9NS62 852 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 AP5S1Q9NUS5 200 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 LRIT1Q9P2V4 623 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 SATB2Q9UPW6 733 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 TTLL3Q9Y4R7 772 aa9.74□□□□□ -0.85
HNRNPC-228ENST00000557033 B3GALT1Q9Y5Z6 326 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms