RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 KAT5Q92993 513 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 SLC35C1Q96A29 364 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 VOPP1Q96AW1 172 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 WRAP53Q9BUR4 548 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 TM6SF2Q9BZW4 377 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ZYG11BQ9C0D3 744 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM168Q9H0V1 697 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 POFUT1Q9H488 388 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ZNF768Q9H5H4 540 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 RETREG1Q9H6L5 497 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 FBXO8Q9NRD0 319 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 SPATS2LQ9NUQ6 558 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ARHGEF38Q9NXL2 777 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 DDX56Q9NY93 547 aaKnown RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 PDP2Q9P2J9 529 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 ARMCX3Q9UH62 379 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 TLK1Q9UKI8 766 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CFAP45Q9UL16 551 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 HPCAL4Q9UM19 191 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 CNTN6Q9UQ52 1028 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 MFHAS1Q9Y4C4 1052 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM184BQ9Y519 407 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-239ENST00000556315 OR1A2Q9Y585 309 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 NBASA2RRP1 2371 aa4.82□□□□□ -1.64
ATXN3-239ENST00000556315 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 TEP1Q99973 2627 aaKnown RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 IGHV1OR21-1A0A087WYE8 117 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 A0A1B0GVL5 298 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 CFAP69A5D8W1 941 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 P4HA2O15460 535 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 RFPL1O75677 317 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 LETM1O95202 739 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 CLDN1O95832 211 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 CYP1A1P04798 512 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 THRAP10827 490 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 KRT5P13647 590 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 CCNB1P14635 433 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 CMA1P23946 247 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 TRIM23P36406 574 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 FMO5P49326 533 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 KIAA1024LP59773 190 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 INPP5JQ15735 1006 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 UGP2Q16851 508 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 KRTAP21-3Q3LHN1 58 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 LRRC73Q5JTD7 316 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 KCTD16Q68DU8 428 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 ERAP2Q6P179 960 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 ARHGAP22Q7Z5H3 698 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 APLFQ8IW19 511 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 WDTC1Q8N5D0 677 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 BMPERQ8N8U9 685 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 ZNF397Q8NF99 534 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 CCL4L1Q8NHW4 92 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 CASKIN2Q8WXE0 1202 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 FUBP1Q96AE4 644 aaKnown RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 PGAP3Q96FM1 320 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 HMCESQ96FZ2 354 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 PDXPQ96GD0 296 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 GDAP1L1Q96MZ0 367 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 NPY6RQ99463 290 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 TSG101Q99816 390 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 GSDMCQ9BYG8 508 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 SLC29A3Q9BZD2 475 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 TTYH3Q9C0H2 523 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 SCAND2PQ9GZW5 306 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 MS4A5Q9H3V2 200 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 FGF22Q9HCT0 170 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 MRPL40Q9NQ50 206 aaKnown RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 ANLNQ9NQW6 1124 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 PIGVQ9NUD9 493 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 C14orf119Q9NWQ9 140 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 TRNAU1APQ9NX07 287 aaKnown RBP4.81□□□□□ -1.64
ATXN3-239ENST00000556315 KCMF1Q9P0J7 381 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 ZNF212Q9UDV6 495 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 MOSPD1Q9UJG1 213 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 KCND3Q9UK17 655 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 RCOR1Q9UKL0 485 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 STAP1Q9ULZ2 295 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 POLHQ9Y253 713 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 SNX10Q9Y5X0 201 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 ACTL7AQ9Y615 435 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 RPS6KL1Q9Y6S9 549 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 FLNCQ14315 2725 aa4.81□□□□□ -1.64
ATXN3-239ENST00000556315 MYH10P35580 1976 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ICE1Q9Y2F5 2266 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ABCA12Q86UK0 2595 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 A0A0G2JNJ9 132 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PIPSLA2A3N6 862 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 ZSCAN5CA6NGD5 496 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 TCP11X1B4DZS4 312 aa4.8□□□□□ -1.64
ATXN3-239ENST00000556315 I6L893 689 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 POLR1CO15160 346 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-239ENST00000556315 PPM1DO15297 605 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms