RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 DENND2DQ9H6A0 471 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 WDR55Q9H6Y2 383 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PFDN4Q9NQP4 134 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 SPATS2LQ9NUQ6 558 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 THG1LQ9NWX6 298 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ELOVL2Q9NXB9 296 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 GTSE1Q9NYZ3 720 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 NUDT4Q9NZJ9 180 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PKD2L2Q9NZM6 624 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 CRLS1Q9UJA2 301 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 IKZF3Q9UKT9 509 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 STK38LQ9Y2H1 464 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 YBX2Q9Y2T7 364 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 TNPO3Q9Y5L0 923 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ALPK3Q96L96 1907 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 HELZP42694 1942 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 A0A0U1RQS6 177 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TTC34A8MYJ7 566 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UPK3BL1B0FP48 263 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 SUPT3HB4E1H0 165 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UPK3BL2E5RIL1 263 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 E9PBE3 544 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 BTN3A1O00481 513 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 DCXO43602 365 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 KLHL41O60662 606 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TULP3O75386 442 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 SUPT3HO75486 399 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 AP2A2O94973 939 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 JUNP05412 331 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UGT2B4P06133 528 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 C1SP09871 688 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ENO3P13929 434 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 EZRP15311 586 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UGT1A6P19224 532 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UGT1A1P22309 533 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UGT1A4P22310 534 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 LHCGRP22888 699 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 PIK3R1P27986 724 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UGT1A3P35503 534 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 UGT1A5P35504 534 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 NRIP1P48552 1158 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 MRPL19P49406 292 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ACADVLP49748 655 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 CLCQ05315 142 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 BTKQ06187 659 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 GRIK2Q13002 908 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ZRSR2Q15696 482 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 RAB30Q15771 203 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 GAB4Q2WGN9 574 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TTLL9Q3SXZ7 439 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 KANK2Q63ZY3 851 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 PGM2L1Q6PCE3 622 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TMC5Q6UXY8 1006 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 CYHR1Q6ZMK1 362 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 PRR23CQ6ZRP0 262 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 LARP4Q71RC2 724 aaKnown RBP eCLIP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 DPPA4Q7L190 304 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 NET1Q7Z628 596 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 RBM23Q86U06 439 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TSPAN33Q86UF1 283 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ZBTB2Q8N680 514 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 NAT16Q8N8M0 369 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ENDOVQ8N8Q3 282 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TMIEQ8NEW7 156 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ING5Q8WYH8 240 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 FGF13Q92913 245 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 PBXIP1Q96AQ6 731 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 MCUR1Q96AQ8 359 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TIFAQ96CG3 184 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 SPACA7Q96KW9 195 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 LENG8Q96PV6 779 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 PANX3Q96QZ0 392 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 COPS8Q99627 209 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 NUSAP1Q9BXS6 441 aaKnown RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ZDHHC6Q9H6R6 413 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 RDH14Q9HBH5 336 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ZBTB26Q9HCK0 441 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TNFRSF12AQ9NP84 129 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 ACSS2Q9NR19 701 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 TMEM45AQ9NWC5 275 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 NDE1Q9NXR1 346 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 KCTD5Q9NXV2 234 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 B4GALT6Q9UBX8 382 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 IL36AQ9UHA7 158 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 BAIAP2L1Q9UHR4 511 aa8.17□□□□□ -1.1
ATXN3-235ENST00000556082 MTF2Q9Y483 593 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-235ENST00000556082 A0A088AWK7 358 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 NPEPPSL1A6NEC2 478 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 TMEM233B4DJY2 109 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 PSMD11O00231 422 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 AZIN1O14977 448 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 KPNA5O15131 536 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 RAD51BO15315 384 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 CCNT2O60583 730 aaKnown RBP8.16□□□□□ -1.1
ATXN3-235ENST00000556082 SNX2O60749 519 aa8.16□□□□□ -1.1
ATXN3-235ENST00000556082 LEFTY1O75610 366 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms