RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TCEAL1Q15170 157 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 C4orf17Q53FE4 359 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FNBP1LQ5T0N5 605 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FAM198BQ6UWH4 519 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 BLOC1S5Q8TDH9 187 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LRFN5Q96NI6 719 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SLC25A23Q9BV35 468 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ING2Q9H160 280 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 KIR3DX1Q9H7L2 352 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LATS2Q9NRM7 1088 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 KCND1Q9NSA2 647 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SPTLC3Q9NUV7 552 aa13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 IMP3Q9NV31 184 aaKnown RBP13.99□□□□□ -0.17
CHMP4BP1-201ENST00000556017 OR6C74A6NCV1 312 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MGAT4DA6NG13 374 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TTLL8A6PVC2 850 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CST8O60676 142 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CPNE3O75131 537 aaKnown RBP13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SCRG1O75711 98 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZBTB11O95625 1053 aaPredicted RBP13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PBLDP30039 288 aaPredicted RBP13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MARCKSL1P49006 195 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CCL11P51671 97 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ITGA1P56199 1179 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 OLIG2Q13516 323 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GTF2H3Q13889 308 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CCDC70Q6NSX1 233 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CYB5D1Q6P9G0 228 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DET1Q7L5Y6 550 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GLT6D1Q7Z4J2 308 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DAAM2Q86T65 1068 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DSELQ8IZU8 1212 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 OR2L2Q8NH16 312 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TFB1MQ8WVM0 346 aaKnown RBP13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZFPM2Q8WW38 1151 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LINC00615Q96LM1 132 aaPredicted RBP13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 NUDT9Q9BW91 350 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MAK16Q9BXY0 300 aaKnown RBP13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 GOLPH3Q9H4A6 298 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LRRC4CQ9HCJ2 640 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 HACD3Q9P035 362 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 POMT2Q9UKY4 750 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ARL5AQ9Y689 179 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PCM1Q15154 2024 aa13.98□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MDC1Q14676 2089 aaKnown RBP13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MEN1O00255 615 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 AGTP01019 485 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 COMTP21964 271 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ADRA1AP35348 466 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PGDP52209 483 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PLCL1Q15111 1095 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PPP2R5EQ16537 467 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 BCL7AQ4VC05 210 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZNF385CQ66K41 422 aaPredicted RBP13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 JMJD6Q6NYC1 403 aaPredicted RBP13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 KLHL35Q6PF15 583 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TMEM151BQ8IW70 566 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 CARFQ8N187 725 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZBTB2Q8N680 514 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RBMXL3Q8N7X1 1067 aaKnown RBP13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ENDOVQ8N8Q3 282 aaKnown RBP13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 FDCSPQ8NFU4 85 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 IPMKQ8NFU5 416 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 OR8K1Q8NGG5 319 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 OR1L3Q8NH93 324 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZNF398Q8TD17 642 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SEC14L1Q92503 715 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MR1Q95460 341 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 C12orf66Q96MD2 445 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TTC25Q96NG3 672 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 C10orf88Q9H8K7 445 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PCMTD2Q9NV79 361 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TCFL5Q9UL49 500 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DOCK10Q96BY6 2186 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 NUP210LQ5VU65 1888 aa13.97□□□□□ -0.17
CHMP4BP1-201ENST00000556017 POLEQ07864 2286 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 hCG_1818297A0A087WSY0 165 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 UBA6A0AVT1 1052 aaPredicted RBP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 SLC9B1P1A6NJY1 282 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TCP11X1B4DZS4 312 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 H3BMH7 237 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 HCRTR1O43613 425 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 VPS4BO75351 444 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PRAMEF1O95521 474 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RAB40ALP0C0E4 278 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MSL3P1P0C860 447 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TNNT1P13805 278 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ST6GAL1P15907 406 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 POLR2CP19387 275 aaPredicted RBP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 HLA-DPA1P20036 260 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RPS15P62841 145 aaKnown RBP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MPP3Q13368 585 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 MRPL49Q13405 166 aaKnown RBP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 XRCC4Q13426 336 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZDHHC20Q5W0Z9 365 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RANBP10Q6VN20 620 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms