RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 FAM46DQ8NEK8 389 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 CD200R1Q8TD46 325 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 GPBAR1Q8TDU6 330 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 INPP5DQ92835 1189 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 GLMNQ92990 594 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 TSNARE1Q96NA8 513 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 FOPNLQ96NB1 174 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 ZIM3Q96PE6 472 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 TMEM109Q9BVC6 243 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
ABCD4-223ENST00000555904 TCEAL2Q9H3H9 227 aaPredicted RBP12.28□□□□□ -0.44
ABCD4-223ENST00000555904 CENPHQ9H3R5 247 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 DPEP2Q9H4A9 486 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 CAB39LQ9H9S4 337 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 LATS2Q9NRM7 1088 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 SNX15Q9NRS6 342 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 SLC23A2Q9UGH3 650 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 DHRS7Q9Y394 339 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 PCYT1BQ9Y5K3 369 aaPredicted RBP12.28□□□□□ -0.44
ABCD4-223ENST00000555904 CSNK1G3Q9Y6M4 447 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 FANCMQ8IYD8 2048 aa12.28□□□□□ -0.44
ABCD4-223ENST00000555904 PLXNB3Q9ULL4 1909 aa12.27□□□□□ -0.44
ABCD4-223ENST00000555904 LMO7DNF2Z398 122 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 EIF3FO00303 357 aaPredicted RBP12.27□□□□□ -0.45
ABCD4-223ENST00000555904 DYNC1I1O14576 645 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 TPP1O14773 563 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 RGS16O15492 202 aaPredicted RBP12.27□□□□□ -0.45
ABCD4-223ENST00000555904 MT-ND3P03897 115 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 AK4P27144 223 aaPredicted RBP12.27□□□□□ -0.45
ABCD4-223ENST00000555904 GCAP28676 217 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 MAPK9P45984 424 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 PREPP48147 710 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 CLCNKAP51800 687 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 TAS2R39P59534 338 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 NHLH1Q02575 133 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 ZNF844Q08AG5 666 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 BIRC2Q13490 618 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 C1orf61Q13536 156 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 SF3A2Q15428 464 aaKnown RBP12.27□□□□□ -0.45
ABCD4-223ENST00000555904 METRNLQ641Q3 311 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 LVRNQ6Q4G3 990 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 MYO1HQ8N1T3 1032 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 NKAPQ8N5F7 415 aaKnown RBP12.27□□□□□ -0.45
ABCD4-223ENST00000555904 LKAAEAR1Q8TD35 194 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 CABS1Q96KC9 395 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 OLFM1Q99784 485 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 EDEM2Q9BV94 578 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 DUSP23Q9BVJ7 150 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 VIPAS39Q9H9C1 493 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 TAAR2Q9P1P5 351 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 PLEKHM1Q9Y4G2 1056 aa12.27□□□□□ -0.45
ABCD4-223ENST00000555904 A0A087X1B8 175 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 PABPN1LA6NDY0 278 aaKnown RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 B4DGG1 531 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 FFAR2O15552 330 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 PHGDHO43175 533 aaKnown RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 SLCO2B1O94956 709 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 ALDOAP04075 364 aaKnown RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 RPN2P04844 631 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 MPOP05164 745 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 ZNF883P0CG24 379 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 F3P13726 295 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 ZNF37AP17032 561 aaPredicted RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 RPL10P27635 214 aaKnown RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 KRT33BQ14525 404 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 ZKSCAN8Q15776 578 aaPredicted RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 AGAP9Q5VTM2 703 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 KLC3Q6P597 504 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 PAQR3Q6TCH7 311 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 NAPRTQ6XQN6 538 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 PRR23CQ6ZRP0 262 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 FAM83HQ6ZRV2 1179 aaPredicted RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 CMC1Q7Z7K0 106 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 PDZD3Q86UT5 571 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 CEP97Q8IW35 865 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 CPNE9Q8IYJ1 553 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 SLC22A15Q8IZD6 547 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 AVL9Q8NBF6 648 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 ACVR1CQ8NER5 493 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 CCL4L1Q8NHW4 92 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 LINGO1Q96FE5 620 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 VPS11Q9H270 941 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 STN1Q9H668 368 aaKnown RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 IL21RQ9HBE5 538 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 TMEM9BQ9NQ34 198 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 TBC1D29Q9UFV1 150 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 LGALS13Q9UHV8 139 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 TSR3Q9UJK0 312 aaKnown RBP12.26□□□□□ -0.45
ABCD4-223ENST00000555904 PSMD13Q9UNM6 376 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 MED16Q9Y2X0 877 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 ACOT9Q9Y305 439 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 HEBP2Q9Y5Z4 205 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 NFS1Q9Y697 457 aa12.26□□□□□ -0.45
ABCD4-223ENST00000555904 A0A096LPK6 155 aa12.25□□□□□ -0.45
ABCD4-223ENST00000555904 SLC5A10A0PJK1 596 aa12.25□□□□□ -0.45
ABCD4-223ENST00000555904 OR5K4A6NMS3 321 aa12.25□□□□□ -0.45
ABCD4-223ENST00000555904 YY2O15391 372 aa12.25□□□□□ -0.45
ABCD4-223ENST00000555904 PCDHGA12O60330 932 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms