RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 OGNP20774 298 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 PSMA3P25788 255 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 MAOBP27338 520 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 ADH6P28332 368 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 GABRB3P28472 473 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SERPINA4P29622 427 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CD70P32970 193 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 ARFIP2P53365 341 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CORO7P57737 925 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SNRPD1P62314 119 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 IRX4P78413 519 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 NTHL1P78549 312 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SATB1Q01826 763 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CCDC15Q0P6D6 951 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 BST1Q10588 318 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 TRAF2Q12933 501 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 FAM83EQ2M2I3 478 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 LACTB2Q53H82 288 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 PITRM1Q5JRX3 1037 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 PRSS36Q5K4E3 855 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 FOXB2Q5VYV0 432 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 FAM45BPQ6NSW5 357 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CGB2Q6NT52 195 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 KLC3Q6P597 504 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 AFTPHQ6ULP2 937 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 GRASPQ7Z6J2 395 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 PIP4P1Q86T03 277 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CLEC14AQ86T13 490 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CILP2Q8IUL8 1156 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 RYBPQ8N488 228 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 OR2AP1Q8NGE2 309 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 FAM45AQ8TCE6 357 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 WFDC5Q8TCV5 224 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 PPP4R1Q8TF05 950 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CCT6BQ92526 530 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 RELTQ969Z4 430 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 ISG20Q96AZ6 181 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CDKN2AIPNLQ96HQ2 116 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 DNAJC1Q96KC8 554 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SIKE1Q9BRV8 207 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 BBS2Q9BXC9 721 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 FAM96AQ9H5X1 160 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 ATP13A3Q9H7F0 1226 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 NMRAL1Q9HBL8 299 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 MAGEE1Q9HCI5 957 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SPHK2Q9NRA0 654 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 FBXO6Q9NRD1 293 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 INTS7Q9NVH2 962 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 INTS10Q9NVR2 710 aaKnown RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 PLK2Q9NYY3 685 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.76□□□□□ -1.33
SLIRP-204ENST00000555890 COPG2Q9UBF2 871 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 KLHL3Q9UH77 587 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 EMCNQ9ULC0 261 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SLC8A2Q9UPR5 921 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 VWA7Q9Y334 891 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 KCTD3Q9Y597 815 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 SPO11Q9Y5K1 396 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 ARL5AQ9Y689 179 aa6.76□□□□□ -1.33
SLIRP-204ENST00000555890 ICE1Q9Y2F5 2266 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 EML5Q05BV3 1969 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TRAV20A0A0B4J274 112 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TMEM114B3SHH9 223 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 NEDD8-MDP1E9PL57 170 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PHGDHO43175 533 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 BUD23O43709 281 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TRIM13O60858 407 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 NDUFS3O75489 264 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ATP5HO75947 161 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PGLSO95336 258 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 GSRP00390 522 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 MT-CO1P00395 513 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PRLP01236 227 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PGRP06401 933 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PDHA1P08559 390 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 RBP1P09455 135 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PIRTP0C851 137 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ARAFP10398 606 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PABPC1P11940 636 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TYRP14679 529 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 SLC8A1P32418 973 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PPARGP37231 505 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 NNMTP40261 264 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 SLC26A3P40879 764 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 RECQLP46063 649 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 SLC1A6P48664 564 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF140P52738 457 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 TAS2R39P59534 338 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 IRF9Q00978 393 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 PCLAFQ15004 111 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 DLG2Q15700 870 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF77Q15935 545 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 SLC5A9Q2M3M2 681 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ACCSLQ4AC99 568 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 AARS2Q5JTZ9 985 aaKnown RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 ATXN7L2Q5T6C5 722 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-204ENST00000555890 XP32Q5T750 250 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 HECTD2Q5U5R9 776 aa6.75□□□□□ -1.33
SLIRP-204ENST00000555890 AGAP9Q5VTM2 703 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms