RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 WNT5BQ9H1J7 359 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 ISCUQ9H1K1 167 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 KRCC1Q9NPI7 259 aaPredicted RBP2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 MCM9Q9NXL9 1143 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 IL20Q9NYY1 176 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 IL36RNQ9UBH0 155 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 HEY2Q9UBP5 337 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 GAGE2DQ9UEU5 116 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 ARMCX3Q9UH62 379 aaPredicted RBP2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 TBK1Q9UHD2 729 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 ZNHIT2Q9UHR6 403 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 LEF1Q9UJU2 399 aaPredicted RBP2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 TINAGQ9UJW2 476 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 FBXL2Q9UKC9 423 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 CFAP45Q9UL16 551 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 CDH7Q9ULB5 785 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 SNX7Q9UNH6 387 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 B3GALT5Q9Y2C3 310 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 KCNK7Q9Y2U2 307 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 MRPL11Q9Y3B7 192 aaKnown RBP2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 KIF3AQ9Y496 699 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 NINLQ9Y2I6 1382 aa2.95□□□□□ -1.94
MTHFD1-212ENST00000555858 ATXN2Q99700 1313 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 POLR2AP24928 1970 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 IGHV4-28A0A0C4DH34 117 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 TMEM272A0A1B0GTI8 110 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 LRRD1A4D1F6 860 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 GOLGA6L9A6NEM1 432 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ANKUB1A6NFN9 424 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 OOEPA6NGQ2 149 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 C2orf81A6NN90 581 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 KCNU1A8MYU2 1149 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 F8VZ95 297 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 TMEM189-UBE2V1I3L0A0 370 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 I6L893 689 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 INO80B-WBP1J3KQ70 363 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 DDX39AO00148 427 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 VWA5AO00534 786 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SLC30A4O14863 429 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CASQ2O14958 399 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ANKRD28O15084 1053 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ZBTB43O43298 467 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 KINO60870 393 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 NDUFS7O75251 213 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 MED24O75448 989 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 NDUFB8O95169 186 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 EPN2O95208 641 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 MT-ND3P03897 115 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CYP1A2P05177 515 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 FAM58BPP0C7Q3 252 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 THEGLP0DJG4 465 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CAPN2P17655 700 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 HLA-DPA1P20036 260 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 KCNA5P22460 613 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ENTPD1P49961 510 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CTSCP53634 463 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SEC61BP60468 96 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 HNRNPKP61978 463 aaKnown RBP eCLIP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 NUCB2P80303 420 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 COL10A1Q03692 680 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 DPTQ07507 201 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 LRRC74AQ0VAA2 488 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 AP1B1Q10567 949 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 COASYQ13057 564 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 MRPL28Q13084 256 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 UBE2V1Q13404 147 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 FHL2Q14192 279 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 RRS1Q15050 365 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SYCP1Q15431 976 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CTF1Q16619 201 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ZXDCQ2QGD7 858 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CCDC152Q4G0S7 254 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 KRTCAP3Q53RY4 240 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SPDYCQ5MJ68 293 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 MANEAQ5SRI9 462 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 OTUD1Q5VV17 481 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SHEQ5VZ18 495 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ALS2CLQ60I27 953 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 C18orf63Q68DL7 685 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 FAM109BQ6ICB4 259 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 DPY19L2P1Q6NXN4 242 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 BRAT1Q6PJG6 821 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 Q6ZSV7 163 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 MCM10Q7L590 875 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CATSPER4Q7RTX7 472 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 YTHDF3Q7Z739 585 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 DSG4Q86SJ6 1040 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 HOOK3Q86VS8 718 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 KLHL7Q8IXQ5 586 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SYCP3Q8IZU3 236 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 Q8N1X5 172 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 C7orf57Q8NEG2 295 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 PRSS3P2Q8NHM4 247 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 C9orf43Q8TAL5 461 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 THAP6Q8TBB0 222 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 GRAPLQ8TC17 118 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 UTP15Q8TED0 518 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 WFIKKN2Q8TEU8 576 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 RND1Q92730 232 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SNX21Q969T3 373 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms