RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 KHDC1Q4VXA5 237 aaKnown RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 AFTPHQ6ULP2 937 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CES3Q6UWW8 571 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CHST15Q7LFX5 561 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CLEC14AQ86T13 490 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CROCCP2Q86T23 111 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 KCNMB4Q86W47 210 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 LMNTD2Q8IXW0 634 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CNPY4Q8N129 248 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 OR4K2Q8NGD2 314 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 OR13J1Q8NGT2 312 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 OR6P1Q8NGX9 317 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 UHMK1Q8TAS1 419 aaKnown RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 CALML6Q8TD86 181 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 FBF1Q8TES7 1133 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 DNAJC1Q96KC8 554 aaKnown RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 PKNOX2Q96KN3 472 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ZNF778Q96MU6 729 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 SLC46A1Q96NT5 459 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 FCRL3Q96P31 734 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 DCBLD2Q96PD2 775 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 TRIM56Q9BRZ2 755 aaKnown RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 TIMM29Q9BSF4 260 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 FAM167BQ9BTA0 163 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 STRADBQ9C0K7 418 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 OR2AG1Q9H205 316 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 NSMCE4AQ9NXX6 385 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 MOCS1Q9NZB8 636 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ZFATQ9P243 1243 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 TXNDC16Q9P2K2 825 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 TBC1D29Q9UFV1 150 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 ATXN7L1Q9ULK2 861 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-215ENST00000555616 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 KCNK6Q9Y257 313 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 PLAAQ9Y263 795 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 KCTD3Q9Y597 815 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 IKBKGQ9Y6K9 419 aa9.47□□□□□ -0.89
ACTN1-215ENST00000555616 RP1P56715 2156 aa9.46□□□□□ -0.89
ACTN1-215ENST00000555616 IGHV1OR21-1A0A087WYE8 117 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 KIR2DS5A0A0G2JLQ3 304 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 A0A0G2JNG1 304 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 GLYATL1P3A0A0U1RQE8 302 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 GOLGA6L10A6NI86 522 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 CDRT15L2A8MXV6 281 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 KIR2DS3K7RE56 304 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 PLD2O14939 933 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 PFDN6O15212 129 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 PPM1DO15297 605 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 RRP8O43159 456 aaKnown RBP9.46□□□□□ -0.9
ACTN1-215ENST00000555616 ZW10O43264 779 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 B4GAT1O43505 415 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 SASH3O75995 380 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 F3P13726 295 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 SLC2A4P14672 509 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 PSMA3P25788 255 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 CD1CP29017 333 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 RBMS1P29558 406 aaKnown RBP9.46□□□□□ -0.9
ACTN1-215ENST00000555616 CSF2RBP32927 897 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 OR1D5P58170 312 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 TMPRSS15P98073 1019 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 KIR2DS5Q14953 304 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 AARS2Q5JTZ9 985 aaKnown RBP9.46□□□□□ -0.9
ACTN1-215ENST00000555616 ZNF648Q5T619 568 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-215ENST00000555616 MRNIPQ6NTE8 343 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 NEPROQ6NW34 567 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 TRMT10BQ6PF06 316 aaKnown RBP9.46□□□□□ -0.9
ACTN1-215ENST00000555616 IYDQ6PHW0 289 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 C19orf48Q6RUI8 117 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 CRTC3Q6UUV7 619 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 LRIG3Q6UXM1 1119 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 RAB11FIP2Q7L804 512 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 TMPRSS9Q7Z410 1059 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 LRRC6Q86X45 466 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 ZNF547Q8IVP9 402 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 CTAGE3PQ8IX95 158 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 AVL9Q8NBF6 648 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 ZNF248Q8NDW4 579 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 DDHD1Q8NEL9 900 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 OR13C4Q8NGS5 318 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 HDAC10Q969S8 669 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.46□□□□□ -0.91e-6■■■■■ 31.4
ACTN1-215ENST00000555616 TMEM159Q96B96 161 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 CDKN2AIPNLQ96HQ2 116 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 NUDT22Q9BRQ3 303 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 EPB41L4BQ9H329 900 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 PLAC1Q9HBJ0 212 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 BPIFA1Q9NP55 256 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 SARS2Q9NP81 518 aaKnown RBP9.46□□□□□ -0.9
ACTN1-215ENST00000555616 FAM53CQ9NYF3 392 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 FETUBQ9UGM5 382 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 SLC2A6Q9UGQ3 507 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 PCDHGA7Q9Y5G6 932 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 SLC30A1Q9Y6M5 507 aa9.46□□□□□ -0.9
ACTN1-215ENST00000555616 CCDC162PA2VCL2 907 aa9.45□□□□□ -0.9
ACTN1-215ENST00000555616 FAM159BA6NKW6 160 aa9.45□□□□□ -0.9
ACTN1-215ENST00000555616 OR5K4A6NMS3 321 aa9.45□□□□□ -0.9
ACTN1-215ENST00000555616 H7C0S8 307 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms