RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ITIH4Q14624 930 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 KCNJ11Q14654 390 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 TGIF1Q15583 401 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 TPSAB1Q15661 275 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 CAPRIN2Q6IMN6 1127 aaKnown RBP20.04■□□□□ 0.8
VTI1B-205ENST00000555543 PACS1Q6VY07 963 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 ZFAND4Q86XD8 727 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 PLXDC1Q8IUK5 500 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 ANP32BQ92688 251 aaKnown RBP20.04■□□□□ 0.8
VTI1B-205ENST00000555543 TGM7Q96PF1 710 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 CCM2Q9BSQ5 444 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 CPNE5Q9HCH3 593 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 PYCARDQ9ULZ3 195 aa20.04■□□□□ 0.8
VTI1B-205ENST00000555543 PIKFYVEQ9Y2I7 2098 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.03■□□□□ 0.8
VTI1B-205ENST00000555543 C17orf113A0A1B0GUU1 675 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 B4E171 279 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 OR1I1O60431 355 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 KRT14P02533 472 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 TSPAN7P41732 249 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 GPS1Q13098 491 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 PCID2Q5JVF3 399 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 ANKRD22Q5VYY1 191 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 NLRP9Q7RTR0 991 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 OR6P1Q8NGX9 317 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 OR4L1Q8NH43 312 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 ACTRT1Q8TDG2 376 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 C9orf72Q96LT7 481 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 FCRL3Q96P31 734 aaPredicted RBP20.03■□□□□ 0.8
VTI1B-205ENST00000555543 TAAR9Q96RI9 348 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 OR52A5Q9H2C5 316 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 SYBUQ9NX95 663 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 NEU2Q9Y3R4 380 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 B3GALT1Q9Y5Z6 326 aa20.03■□□□□ 0.8
VTI1B-205ENST00000555543 SDK2Q58EX2 2172 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 KIF1CO43896 1103 aaKnown RBP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 TMEM63AO94886 807 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 AP2A2O94973 939 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 ANKRD34CP0C6C1 535 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 MGAT1P26572 445 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 PDHA2P29803 388 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 NSG1P42857 185 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 MAGEA6P43360 314 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 PREPP48147 710 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 CXADRP78310 365 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 PRAMEP78395 509 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 SRSF6Q13247 344 aaKnown RBP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 BROXQ5VW32 411 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 LRRC8BQ6P9F7 803 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 CCDC137Q6PK04 289 aaKnown RBP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 PEX13Q92968 403 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 NAP1L3Q99457 506 aaPredicted RBP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 B3GNT4Q9C0J1 378 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 IL22Q9GZX6 179 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 VPS37BQ9H9H4 285 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 TREX1Q9NSU2 369 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 SIDT1Q9NXL6 827 aaKnown RBP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 SLC39A1Q9NY26 324 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 MARCH4Q9P2E8 410 aaPredicted RBP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 PCDHGA3Q9Y5H0 932 aa20.02■□□□□ 0.8
VTI1B-205ENST00000555543 SMG1Q96Q15 3661 aaKnown RBP20.02■□□□□ 0.8
VTI1B-205ENST00000555543 PHF2O75151 1096 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 LIPCP11150 499 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 NMBRP28336 390 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 CDK16Q00536 496 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 PLCL1Q15111 1095 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 TMEM164Q5U3C3 297 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 ANKS6Q68DC2 871 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 IRGCQ6NXR0 463 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 CPT1BQ92523 772 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 SGSM3Q96HU1 749 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 DDA1Q9BW61 102 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 KIR3DX1Q9H7L2 352 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 APMAPQ9HDC9 416 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.01■□□□□ 0.79
VTI1B-205ENST00000555543 BFARQ9NZS9 450 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 EPHA6Q9UF33 1036 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 SLC24A2Q9UI40 661 aa20.01■□□□□ 0.79
VTI1B-205ENST00000555543 CES2O00748 559 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 AVILO75366 819 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 NPY2RP49146 381 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 SEPHS1P49903 392 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 TMPRSS3P57727 454 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 MC2RQ01718 297 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 CES3Q6UWW8 571 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 NAPRTQ6XQN6 538 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 FAM92BQ6ZTR7 304 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 PRSS42Q7Z5A4 293 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 LDB1Q86U70 411 aaPredicted RBP20■□□□□ 0.79
VTI1B-205ENST00000555543 DTX1Q86Y01 620 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 NRTNQ99748 197 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 CTRCQ99895 268 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 KIFC1Q9BW19 673 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 ZNF768Q9H5H4 540 aaKnown RBP20■□□□□ 0.79
VTI1B-205ENST00000555543 WDR70Q9NW82 654 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 ATMQ13315 3056 aa20■□□□□ 0.79
VTI1B-205ENST00000555543 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.99■□□□□ 0.79
VTI1B-205ENST00000555543 RASSF9O75901 435 aa19.99■□□□□ 0.79
VTI1B-205ENST00000555543 ARNTP27540 789 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms