RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ARHGEF2Q92974 986 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 ZKSCAN4Q969J2 545 aaPredicted RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 FOXN4Q96NZ1 517 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 SEC62Q99442 399 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 RTP3Q9BQQ7 232 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 PELI2Q9HAT8 420 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 MBNL1Q9NR56 388 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 FAM120CQ9NX05 1096 aaKnown RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 EHD2Q9NZN4 543 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 KLHL8Q9P2G9 620 aaPredicted RBP3.11□□□□□ -1.91
SNX6-204ENST00000555541 GAGE2DQ9UEU5 116 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 CSAG2Q9Y5P2 127 aa3.11□□□□□ -1.91
SNX6-204ENST00000555541 SLCO1B7G3V0H7 640 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 PI15O43692 258 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 RTN3O95197 1032 aaPredicted RBP3.1□□□□□ -1.91
SNX6-204ENST00000555541 AGR2O95994 175 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 DNAH10OSP0CZ25 163 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 ACTN1P12814 892 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 CKMT2P17540 419 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 CDH2P19022 906 aaPredicted RBP3.1□□□□□ -1.91
SNX6-204ENST00000555541 TYMPP19971 482 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 PSMA4P25789 261 aaKnown RBP3.1□□□□□ -1.91
SNX6-204ENST00000555541 KCNJ10P78508 379 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 EIF4A2Q14240 407 aaKnown RBP3.1□□□□□ -1.91
SNX6-204ENST00000555541 MED22Q15528 200 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 MEP1AQ16819 746 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 GTDC1Q4AE62 458 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 INTS11Q5TA45 600 aaKnown RBP3.1□□□□□ -1.91
SNX6-204ENST00000555541 DENND5BQ6ZUT9 1274 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 ZNF843Q8N446 348 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 ZNF611Q8N823 705 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 ZNF614Q8N883 585 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 PCYOX1LQ8NBM8 494 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 ZNRF4Q8WWF5 429 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 NUDCD1Q96RS6 583 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 PLCXD1Q9NUJ7 323 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 SETD4Q9NVD3 440 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 MTMR6Q9Y217 621 aa3.1□□□□□ -1.91
SNX6-204ENST00000555541 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 LIPT2A6NK58 231 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 OR6C76A6NM76 312 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 NGFP01138 241 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 FRMD6-AS1P0C7T7 363 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 HSPA1AP0DMV8 641 aaKnown RBP3.09□□□□□ -1.91
SNX6-204ENST00000555541 HSPA1BP0DMV9 641 aaKnown RBP3.09□□□□□ -1.91
SNX6-204ENST00000555541 TMEM11P17152 192 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 RARS2Q5T160 578 aaKnown RBP3.09□□□□□ -1.91
SNX6-204ENST00000555541 TMEM198Q66K66 360 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 JADE1Q6IE81 842 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 CFAP77Q6ZQR2 320 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 CPLX4Q7Z7G2 160 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 CRYBG2Q8N1P7 616 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 FBXL16Q8N461 479 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 MRGPRDQ8TDS7 321 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 MORC4Q8TE76 937 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 GIMAP5Q96F15 307 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 ELMOD3Q96FG2 381 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 OR2A14Q96R47 310 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 ZNF300Q96RE9 604 aaPredicted RBP3.09□□□□□ -1.91
SNX6-204ENST00000555541 SLC22A12Q96S37 553 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 DENND2DQ9H6A0 471 aaPredicted RBP3.09□□□□□ -1.91
SNX6-204ENST00000555541 MIOSQ9NXC5 875 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 C9orf78Q9NZ63 289 aaPredicted RBP3.09□□□□□ -1.91
SNX6-204ENST00000555541 GTF2A1LQ9UNN4 478 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 RABGAP1Q9Y3P9 1069 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 PIAS3Q9Y6X2 628 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 ZHX2Q9Y6X8 837 aa3.09□□□□□ -1.91
SNX6-204ENST00000555541 IGHV4-61A0A0C4DH41 118 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 A8MZ25 164 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 RTL8CO15255 209 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 GPC4O75487 556 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 TRMUO75648 421 aaKnown RBP3.08□□□□□ -1.92
SNX6-204ENST00000555541 IGHV4-59P01825 116 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 H1F0P07305 194 aaKnown RBP3.08□□□□□ -1.92
SNX6-204ENST00000555541 HMBSP08397 361 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 CEBPBP17676 345 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 CEACAM8P31997 349 aaPredicted RBP3.08□□□□□ -1.92
SNX6-204ENST00000555541 SLC8A3P57103 927 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 ASTE1Q2TB18 679 aaPredicted RBP3.08□□□□□ -1.92
SNX6-204ENST00000555541 PWWP2BQ6NUJ5 590 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 ZNF774Q6NX45 483 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 KLC3Q6P597 504 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 TMTC3Q6ZXV5 915 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 RSRC2Q7L4I2 434 aaKnown RBP3.08□□□□□ -1.92
SNX6-204ENST00000555541 GALNT5Q7Z7M9 940 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 ERC1Q8IUD2 1116 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 TMEM143Q96AN5 459 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 SLA2Q9H6Q3 261 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 OLFML3Q9NRN5 406 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 SLC7A7Q9UM01 511 aa3.08□□□□□ -1.92
SNX6-204ENST00000555541 A0A087WW49 117 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 PLEKHD1A6NEE1 506 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 A8MU10 97 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 TPD52L2O43399 206 aaKnown RBP3.07□□□□□ -1.92
SNX6-204ENST00000555541 AP2A2O94973 939 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 EDN1P05305 212 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 NFKBIAP25963 317 aa3.07□□□□□ -1.92
SNX6-204ENST00000555541 SNX16P57768 344 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms