RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SAP18O00422 153 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 AURKAO14965 403 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PAGE1O75459 146 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 DDNO94850 711 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 DRD4P21917 467 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 GJA9P57773 515 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TLE2Q04725 743 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF709Q8N972 641 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 DNERQ8NFT8 737 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 ACTRT1Q8TDG2 376 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 DCAKDQ8WVC6 231 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 SHC3Q92529 594 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TRMT61BQ9BVS5 477 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TBL1XR1Q9BZK7 514 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 IRF2BPLQ9H1B7 796 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 METTL7AQ9H8H3 244 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 FARSBQ9NSD9 589 aaKnown RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 NPR2P20594 1047 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 PTENP60484 403 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 OR4C6Q8NH72 309 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 RDH11Q8TC12 318 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM125Q96AQ2 219 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 YIPF4Q9BSR8 244 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 FTHL17Q9BXU8 183 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 SLC28A3Q9HAS3 691 aa6.81□□□□□ -1.32
SYNE2-216ENST00000555002 POLR3BQ9NW08 1133 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-216ENST00000555002 SLC35F4A4IF30 521 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 UGT2B11O75310 529 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CLPXO76031 633 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CDK9P50750 372 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ILF3Q12906 894 aaKnown RBP eCLIP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 DUSP4Q13115 394 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PCBP2Q15366 365 aaKnown RBP eCLIP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CA9Q16790 459 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF720Q7Z2F6 126 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 KIAA0319LQ8IZA0 1049 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 C12orf66Q96MD2 445 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 OR2AG1Q9H205 316 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 HEBP2Q9Y5Z4 205 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 KANTRA0A1W2PQU2 76 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PGLSO95336 258 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 GOT1P17174 413 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 HOXB8P17481 243 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF844Q08AG5 666 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SCGB2A2Q13296 93 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 Q4G0T1 1027 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 C10orf107Q8IVU9 208 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 OR7D4Q8NG98 312 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 COPS5Q92905 334 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 RFKQ969G6 155 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 NPLQ9BXD5 320 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 WDR12Q9GZL7 423 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 FAM105AQ9NUU6 356 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 GRHL1Q9NZI5 618 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ERVK-7P63135 1459 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 TNFRSF11BO00300 401 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SLC35G6P0C7Q6 338 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 KDELR1P24390 212 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF41P51814 821 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ANTXR2P58335 489 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 AADATQ8N5Z0 425 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CCDC107Q8WV48 283 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 RIOK2Q9BVS4 552 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 LRMDAQ9H2I8 198 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ANKZF1Q9H8Y5 726 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 MRPS30Q9NP92 439 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 BLOC1S4Q9NUP1 217 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 GSKIPQ9P0R6 139 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 TELO2Q9Y4R8 837 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ALG5Q9Y673 324 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 FAM237BA0A1B0GVD1 139 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SHOXO15266 292 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SYNGR4O95473 234 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 RLN2P04090 185 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ATP5A1P25705 553 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 APLP1P51693 650 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SNU13P55769 128 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 FOLH1Q04609 750 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 DCST1Q5T197 706 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 LIPMQ5VYY2 423 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 RAB12Q6IQ22 244 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 OTOP2Q7RTS6 562 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 DEFB132Q7Z7B7 95 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PLA2G15Q8NCC3 412 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 RADILQ96JH8 1075 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 E7ENX8 843 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SCGB2A1O75556 95 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PTGS2P35354 604 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CDK10Q15131 360 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 C2orf27AQ580R0 203 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 NET1Q7Z628 596 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 GPR180Q86V85 440 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 UFD1Q92890 307 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SLC39A3Q9BRY0 314 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 NOL11Q9H8H0 719 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 TRNAU1APQ9NX07 287 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 NCDNQ9UBB6 729 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 C13orf42A0A1B0GVH6 325 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 MUSKO15146 869 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms